RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 COMMD9Q9P000 198 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
SF3A1-203ENST00000444440 IGLC7A0M8Q6 106 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 FABP12A6NFH5 140 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 MFSD2BA6NFX1 497 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 ZNF701M0R085 212 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-203ENST00000444440 RAB3DO95716 219 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 DHFRP00374 187 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 PSMB6P28072 239 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 TNFSF8P32971 234 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 S100A5P33763 92 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 LPAR6P43657 344 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 MEF2DQ14814 521 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 KLK9Q2XQG4 91 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 ZNF585BQ52M93 769 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 PHLDA2Q53GA4 152 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 STEAP1BQ6NZ63 245 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 OR10W1Q8NGF6 305 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 TERB2Q8NHR7 220 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 SMIM4Q8WVI0 70 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-203ENST00000444440 COMMD5Q9GZQ3 224 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 SLIRPQ9GZT3 109 aaKnown RBP8.24□□□□□ -1.09
SF3A1-203ENST00000444440 NXF2Q9GZY0 626 aaKnown RBP8.24□□□□□ -1.09
SF3A1-203ENST00000444440 TMEM140Q9NV12 185 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 FBXL7Q9UJT9 491 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 KLK9Q9UKQ9 250 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
SF3A1-203ENST00000444440 PLECQ15149 4684 aaKnown RBP8.24□□□□□ -1.09
SF3A1-203ENST00000444440 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 DBX1A6NMT0 343 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 DISC1C4P0D8 188 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 GSTZ1O43708 216 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-203ENST00000444440 SNAPC5O75971 98 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 CD74P04233 296 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 FGF2P09038 288 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 AKAIN1P0CW23 69 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 SCGB2B2Q4G0G5 96 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 CLEC19AQ6UXS0 136 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 TBC1D26Q86UD7 250 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 CADM3Q8N126 398 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 CACNG8Q8WXS5 425 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 C19orf73Q9NVV2 129 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 FKBP11Q9NYL4 201 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 SIGLEC8Q9NYZ4 499 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 NSG2Q9Y328 171 aa8.23□□□□□ -1.09
SF3A1-203ENST00000444440 MARCH11A6NNE9 402 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 CYB5BO43169 146 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 ATG12O94817 140 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 OR2C1O95371 312 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 KRASP01116 189 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 SERPINE2P07093 398 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 G6PCP35575 357 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 MFAP2P55001 183 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 RND3P61587 244 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 CD300EQ496F6 205 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-203ENST00000444440 FAM209BQ5JX69 171 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 THOC7Q6I9Y2 204 aaKnown RBP8.22□□□□□ -1.09
SF3A1-203ENST00000444440 LHFPL1Q86WI0 220 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 CCDC71LQ8N9Z2 235 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 RCHY1Q96PM5 261 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 SRSF8Q9BRL6 282 aaKnown RBP8.22□□□□□ -1.09
SF3A1-203ENST00000444440 TM2D3Q9BRN9 247 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 ZC4H2Q9NQZ6 224 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 NDUFA13Q9P0J0 144 aa8.22□□□□□ -1.09
SF3A1-203ENST00000444440 TEX50A0A1B0GTY4 177 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 ZNF785A8K8V0 405 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 A8MZ25 164 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 DEFA4P12838 97 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 HIST1H1BP16401 226 aaKnown RBP8.21□□□□□ -1.1
SF3A1-203ENST00000444440 PTBP1P26599 531 aaKnown RBP eCLIP8.21□□□□□ -1.1
SF3A1-203ENST00000444440 PIGPP57054 158 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 WT1-ASQ06250 92 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 HSD17B13Q7Z5P4 300 aaPredicted RBP8.21□□□□□ -1.1
SF3A1-203ENST00000444440 OR1L8Q8NGR8 309 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 ZNF414Q96IQ9 312 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 TSC22D3Q99576 134 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 PRRT1Q99946 306 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 SOSTQ9BQB4 213 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 COPZ2Q9P299 210 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 SCP2D1Q9UJQ7 156 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 PRNDQ9UKY0 176 aa8.21□□□□□ -1.1
SF3A1-203ENST00000444440 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.1
SF3A1-203ENST00000444440 ANKRD20A5PA0PJZ0 165 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 TMEM213A2RRL7 107 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
SF3A1-203ENST00000444440 B3GALNT1O75752 331 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 CD7P09564 240 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 TRAPPC2P0DI81 140 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 TRAPPC2BP0DI82 140 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 FOLR2P14207 255 aa8.2□□□□□ -1.1
SF3A1-203ENST00000444440 FAUP35544 74 aaKnown RBP8.2□□□□□ -1.1
SF3A1-203ENST00000444440 ARL3P36405 182 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms