RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 WDR12Q9GZL7 423 aaKnown RBP10.76□□□□□ -0.69
TREX1-202ENST00000444177 SLC2A9Q9NRM0 540 aa10.76□□□□□ -0.69
TREX1-202ENST00000444177 ZNF257Q9Y2Q1 563 aa10.76□□□□□ -0.69
TREX1-202ENST00000444177 U3KQK5 164 aa10.76□□□□□ -0.69
TREX1-202ENST00000444177 A0A1B0GW64 132 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 UPK2O00526 184 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 OR2J3O76001 311 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 LY86O95711 162 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 CTSDP07339 412 aaPredicted RBP10.75□□□□□ -0.69
TREX1-202ENST00000444177 IL7P13232 177 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 AREGP15514 252 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 ZP3P21754 424 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 LPAR6P43657 344 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 ZNF343Q6P1L6 599 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 CCDC71LQ8N9Z2 235 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 OR13C8Q8NGS7 320 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 MRGPRFQ96AM1 343 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 COMMD5Q9GZQ3 224 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 MCUBQ9NWR8 336 aa10.75□□□□□ -0.69
TREX1-202ENST00000444177 PEF1Q9UBV8 284 aaKnown RBP10.75□□□□□ -0.69
TREX1-202ENST00000444177 TNCP24821 2201 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 CGB1A6NKQ9 187 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 KRASP01116 189 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 TRBV12-3P01733 135 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 REG1AP05451 166 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 G6PCP35575 357 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
TREX1-202ENST00000444177 ACSM6Q6P461 480 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 CADM3Q8N126 398 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
TREX1-202ENST00000444177 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 SMAD5-AS1Q9Y6J3 95 aa10.74□□□□□ -0.69
TREX1-202ENST00000444177 TRBV9A0A0B4J1U6 114 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 CENPXA8MT69 81 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 DHFRP00374 187 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 FGF2P09038 288 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 SPNP16150 400 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 PI3P19957 117 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 PSMB6P28072 239 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 PIGPP57054 158 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 OR2B8PP59922 312 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 RPEL1Q2QD12 228 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 ZNF585BQ52M93 769 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 ELOVL1Q9BW60 279 aa10.73□□□□□ -0.69
TREX1-202ENST00000444177 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
TREX1-202ENST00000444177 H0Y980 276 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 SNAPC5O75971 98 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 CRYGCP07315 174 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 DEFA4P12838 97 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 CTRB1P17538 263 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 SYNJ2BPP57105 145 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 CTRB2Q6GPI1 263 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 OR4C12Q96R67 309 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 RTBDNQ9BSG5 229 aaPredicted RBP10.72□□□□□ -0.69
TREX1-202ENST00000444177 HINT2Q9BX68 163 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
TREX1-202ENST00000444177 COPZ2Q9P299 210 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
TREX1-202ENST00000444177 IGLC7A0M8Q6 106 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 RYR3Q15413 4870 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 RBMS2Q15434 407 aaKnown RBP10.71□□□□□ -0.69
TREX1-202ENST00000444177 HAPLN4Q86UW8 402 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 OR9G4Q8NGQ1 327 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 FANCD2OSQ96PS1 177 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 SRSF8Q9BRL6 282 aaKnown RBP10.71□□□□□ -0.69
TREX1-202ENST00000444177 C5orf66Q9H5L9 145 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 OR51B2Q9Y5P1 312 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 S4R3C0 116 aa10.71□□□□□ -0.69
TREX1-202ENST00000444177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
TREX1-202ENST00000444177 C3orf85A0A1B0GTC6 90 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 BMPR1BO00238 502 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 NDUFB8O95169 186 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 SERPINE2P07093 398 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 TRAPPC2P0DI81 140 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 TRAPPC2BP0DI82 140 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 GP9P14770 177 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 HIST1H1BP16401 226 aaKnown RBP10.7□□□□□ -0.7
TREX1-202ENST00000444177 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
TREX1-202ENST00000444177 TATDN3Q17R31 274 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
TREX1-202ENST00000444177 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 PRNDQ9UKY0 176 aa10.7□□□□□ -0.7
TREX1-202ENST00000444177 IGLV11-55A0A075B6I3 123 aa10.69□□□□□ -0.7
TREX1-202ENST00000444177 TEX50A0A1B0GTY4 177 aa10.69□□□□□ -0.7
TREX1-202ENST00000444177 CRYM-AS1A6NIL9 109 aa10.69□□□□□ -0.7
TREX1-202ENST00000444177 C15orf61A6NNL5 157 aa10.69□□□□□ -0.7
TREX1-202ENST00000444177 PPP5D1E7EU14 171 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms