RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
CHFR-204ENST00000443047 RNASEKQ6P5S7 137 aaKnown RBP12.61□□□□□ -0.39
CHFR-204ENST00000443047 C19orf35Q6ZS72 473 aa12.61□□□□□ -0.39
CHFR-204ENST00000443047 YTHDF2Q9Y5A9 579 aaKnown RBP12.61□□□□□ -0.39
CHFR-204ENST00000443047 MED12LQ86YW9 2145 aa12.61□□□□□ -0.39
CHFR-204ENST00000443047 TRAV8-6A0A0B4J262 113 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 H0Y8G0 127 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 CEP250Q9BV73 2442 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 hDV102S1A0JD36 115 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 RRHO14718 337 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 GNG7O60262 68 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 CA1P00915 261 aaPredicted RBP12.6□□□□□ -0.39
CHFR-204ENST00000443047 ARG2P78540 354 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 TMEM136Q6ZRR5 245 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 KIR3DL3Q8N743 410 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 ZNF808Q8N4W9 903 aaPredicted RBP12.6□□□□□ -0.39
CHFR-204ENST00000443047 C1QTNF5Q9BXJ0 243 aa12.6□□□□□ -0.39
CHFR-204ENST00000443047 APCSP02743 223 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 SP1P08047 785 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 NPY1RP25929 384 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
CHFR-204ENST00000443047 TIMM8BQ9Y5J9 83 aaPredicted RBP12.59□□□□□ -0.39
CHFR-204ENST00000443047 ZFHX2Q9C0A1 2572 aaPredicted RBP12.59□□□□□ -0.39
CHFR-204ENST00000443047 FAM181BA6NEQ2 426 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 SNAI2O43623 268 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 OR7C2O60412 319 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 SSTR5P35346 364 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 GABRA6Q16445 453 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 NAA38Q9BRA0 125 aaKnown RBP12.59□□□□□ -0.39
CHFR-204ENST00000443047 ABI3Q9P2A4 366 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 V9GYV3 84 aa12.59□□□□□ -0.39
CHFR-204ENST00000443047 C21orf140B9A014 251 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 NBEAP1P0C6P0 100 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 RAC2P15153 192 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 SMIM21Q3B7S5 101 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 PDLIM3Q53GG5 364 aaPredicted RBP12.58□□□□□ -0.4
CHFR-204ENST00000443047 MIC13Q5XKP0 118 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 SSMEM1Q8WWF3 244 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 EAF1Q96JC9 268 aaPredicted RBP12.58□□□□□ -0.4
CHFR-204ENST00000443047 MTCH1Q9NZJ7 389 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 IGKV3D-15A0A087WSY6 115 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 GPR6P46095 362 aaPredicted RBP12.58□□□□□ -0.4
CHFR-204ENST00000443047 UBE2G1P62253 170 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 WDR73Q6P4I2 378 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 SPATA12Q7Z6I5 190 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 TMEM45BQ96B21 275 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 CHRDL1Q9BU40 450 aa12.58□□□□□ -0.4
CHFR-204ENST00000443047 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
CHFR-204ENST00000443047 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
CHFR-204ENST00000443047 A0A087X0K7 114 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 GAGE10A6NGK3 116 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 J3QW42 95 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 SYNGR1O43759 233 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
CHFR-204ENST00000443047 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 CX3CL1P78423 397 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 SLAQ13239 276 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
CHFR-204ENST00000443047 DCHS1Q96JQ0 3298 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 TRBV9A0A0B4J1U6 114 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
CHFR-204ENST00000443047 H0YJW9 148 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 USF1P22415 310 aaPredicted RBP12.57□□□□□ -0.4
CHFR-204ENST00000443047 CD1BP29016 333 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 FGF12P61328 243 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 SSBP3Q9BWW4 388 aaPredicted RBP12.57□□□□□ -0.4
CHFR-204ENST00000443047 SPRR3Q9UBC9 169 aa12.57□□□□□ -0.4
CHFR-204ENST00000443047 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 PMS2P5A8MQ11 134 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 NKX2-8O15522 239 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 FOXH1O75593 365 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 MT-ND6P03923 174 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 CA6P23280 308 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 GNG4P50150 75 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 LINC00205P59089 165 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 Q6ZS49 121 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 STPG3Q8N7X2 389 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 C18orf32Q8TCD1 76 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 PRDM14Q9GZV8 571 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 TRAV9-1A0A075B6T8 112 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 SPAARA0A1B0GVQ0 90 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 LINC00869P0C866 280 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 RPL8P62917 257 aaKnown RBP12.56□□□□□ -0.4
CHFR-204ENST00000443047 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
CHFR-204ENST00000443047 COLCA1Q6ZS62 124 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 DRAM1Q8N682 238 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
CHFR-204ENST00000443047 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms