RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TCRBP04435 133 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 ANXA7P20073 488 aaKnown RBP12.44□□□□□ -0.42
USP39-205ENST00000442708 VAMP1P23763 118 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 LYZL2Q7Z4W2 148 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 ZNF695Q8IW36 515 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 SLC35G3Q8N808 338 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 OR1L8Q8NGR8 309 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 GPR146Q96CH1 333 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 DUX3Q96PT4 197 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 OR5B12Q96R08 314 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 TSC22D3Q99576 134 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 CMYA5Q8N3K9 4069 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 H3BUA1 57 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 I3L521 148 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 CRYGCP07315 174 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 CTRB1P17538 263 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 PSMB6P28072 239 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 TPPP2P59282 170 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 CTRB2Q6GPI1 263 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 HINT2Q9BX68 163 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 ALX4Q9H161 411 aaPredicted RBP12.43□□□□□ -0.42
USP39-205ENST00000442708 C20orf85Q9H1P6 137 aa12.43□□□□□ -0.42
USP39-205ENST00000442708 TRBV9A0A0B4J1U6 114 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 C9orf170A2RU37 121 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 NUDT19A8MXV4 375 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 ST8SIA3O43173 380 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 WIPF1O43516 503 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 ATG12O94817 140 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 BRI3O95415 125 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 SPINK9Q5DT21 86 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 TREML4Q6UXN2 200 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 LGI3Q8N145 548 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 OR5B3Q8NH48 314 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 RRNAD1Q96FB5 475 aaKnown RBP12.42□□□□□ -0.42
USP39-205ENST00000442708 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 ZNF257Q9Y2Q1 563 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 DMRT1Q9Y5R6 373 aa12.42□□□□□ -0.42
USP39-205ENST00000442708 TRAV6A0A075B6T7 132 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 IGHV3-11P01762 117 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 OR4E1P0C645 316 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 ANXA3P12429 323 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 UBE2MP61081 183 aaKnown RBP12.41□□□□□ -0.42
USP39-205ENST00000442708 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 FAM219AQ8IW50 185 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 LRTM2Q8N967 370 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 OR4F17Q8NGA8 305 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 RNASE11Q8TAA1 199 aaKnown RBP12.41□□□□□ -0.42
USP39-205ENST00000442708 LSM10Q969L4 123 aaKnown RBP12.41□□□□□ -0.42
USP39-205ENST00000442708 OR4F4Q96R69 305 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 NUDT15Q9NV35 164 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
USP39-205ENST00000442708 MGAM2Q2M2H8 2515 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 A0A0B4J2A0 478 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 OR13C7P0DN81 318 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 MFAP2P55001 183 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 HSPE1P61604 102 aaKnown RBP12.4□□□□□ -0.42
USP39-205ENST00000442708 RHOGP84095 191 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 PRCDQ00LT1 54 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 DHRS2Q13268 280 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 KLK9Q2XQG4 91 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 AARDQ4LEZ3 155 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 MZT2BQ6NZ67 158 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 LYG2Q86SG7 212 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 OR52B4Q8NGK2 314 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
USP39-205ENST00000442708 SHPKQ9UHJ6 478 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 KLK9Q9UKQ9 250 aa12.4□□□□□ -0.42
USP39-205ENST00000442708 FAM240BA0A1B0GVZ2 78 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 OR2J3O76001 311 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 NDUFB8O95169 186 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
USP39-205ENST00000442708 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
USP39-205ENST00000442708 RAB25P57735 213 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 SRPXP78539 464 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 RUNX1Q01196 453 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
USP39-205ENST00000442708 P2RX4Q99571 388 aa12.39□□□□□ -0.43
USP39-205ENST00000442708 IGLV11-55A0A075B6I3 123 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 CCL24O00175 119 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 NXPH3O95157 252 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 MECP2P51608 486 aaKnown RBP12.38□□□□□ -0.43
USP39-205ENST00000442708 C4orf46Q504U0 113 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 NRARPQ7Z6K4 114 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 MRPL41Q8IXM3 137 aaKnown RBP12.38□□□□□ -0.43
USP39-205ENST00000442708 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
USP39-205ENST00000442708 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms