RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ANKRD11Q6UB99 2663 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 K7EN84 100 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 MPDU1O75352 247 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 LHBP01229 141 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 OR10J4P0C629 311 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 TNFAIP6P98066 277 aaPredicted RBP11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 ZCCHC14Q8WYQ9 949 aaKnown RBP11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 TMPRSS2O15393 492 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 NDUFB7P17568 137 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 SLC35B1P78383 322 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 AARDQ4LEZ3 155 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 ACY3Q96HD9 319 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 ELOVL5Q9NYP7 299 aa11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
HERPUD1-204ENST00000439977 J3QR06 171 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 CGB3P0DN86 165 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 CGB7P0DN87 165 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 ADMP35318 185 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 GLRXP35754 106 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 ZNF90Q03938 601 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 PSG5Q15238 335 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 USF2Q15853 346 aaPredicted RBP11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 IGKV1OR2-108A0A075B7D4 117 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 TMEM18Q96B42 140 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 TUBG2Q9NRH3 451 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 TMEM14BQ9NUH8 114 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 SH3BGRL2Q9UJC5 107 aa11.1□□□□□ -0.63
HERPUD1-204ENST00000439977 ACACAQ13085 2346 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 TYMSP04818 313 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 TMPRSS3P57727 454 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 CR1LQ2VPA4 569 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 ZADH2Q8N4Q0 377 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 OR5R1Q8NH85 324 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 MBD3L4A6NDZ8 208 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 MBD3L3A6NE82 208 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 MBD3L5A6NJ08 208 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 CRYBB3P26998 211 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 RHOBP62745 196 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 LCN2P80188 198 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 PAX5Q02548 391 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 MBD3L2Q8NHZ7 208 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 MISP3Q96FF7 219 aa11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 PTPRZ1P23471 2315 aaPredicted RBP11.09□□□□□ -0.63
HERPUD1-204ENST00000439977 A0A1B0GWJ7 208 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 OR7C2O60412 319 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 CT45A6P0DMU7 189 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 CT45A5P0DMU8 189 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 CT45A7P0DMV0 189 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 CFHR2P36980 270 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 PDLIM4P50479 330 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 RAB7AP51149 207 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 SSX2Q16385 188 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 REC114Q7Z4M0 266 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 PIP4P1Q86T03 277 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 DOLPP1Q86YN1 238 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 OR9G1Q8NH87 305 aa11.08□□□□□ -0.63
HERPUD1-204ENST00000439977 FAM90A9PA6NNJ1 464 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 CCL3L1P16619 93 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 ERVFC1-1P60608 527 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 GBGT1Q8N5D6 347 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 GAFA1Q96PS6 74 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 PLEKHA3Q9HB20 300 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 A8MWP6 167 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 TCL1AP56279 114 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 FOXL1Q12952 345 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 RAB31Q13636 194 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 FXYD3Q14802 87 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 DMRTC2Q8IXT2 367 aaPredicted RBP11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 FOXA2Q9Y261 457 aaPredicted RBP11.08□□□□□ -0.64
HERPUD1-204ENST00000439977 ZNF292O60281 2723 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 TRGV8A0A0C4DH27 118 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 LINC00869P0C866 280 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 OR10J1P30954 320 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 IER3P46695 156 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 F2Z2F3 143 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 STUMQ69YW2 141 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 ABCA1O95477 2261 aa11.07□□□□□ -0.64
HERPUD1-204ENST00000439977 E7EUB6 86 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 CD99P14209 185 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 CHRNB4P30926 498 aa11.06□□□□□ -0.64
HERPUD1-204ENST00000439977 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms