RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 SPRNQ5BIV9 151 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 UTF1Q5T230 341 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 STPG3Q8N7X2 389 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 BEND2Q8NDZ0 799 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 TMEM204Q9BSN7 226 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 TMEM14BQ9NUH8 114 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 RHOBP62745 196 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 EFNB3Q15768 340 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 SPATA31B1PQ5VZV4 182 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 TEPPQ6URK8 271 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 RPRMLQ8N4K4 120 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 OR2V2Q96R30 315 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 FAM215AQ9Y5M1 114 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 NBEAQ8NFP9 2946 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 SAA2-SAA4A0A096LPE2 208 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 MBD3L4A6NDZ8 208 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 MBD3L3A6NE82 208 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 MBD3L5A6NJ08 208 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 LHBP01229 141 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 SAA2P0DJI9 122 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 RPL29P47914 159 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 CT45A1Q5HYN5 189 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 CT45A3Q8NHU0 189 aa13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 MBD3L2Q8NHZ7 208 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 SEPSECSQ9HD40 501 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-203ENST00000439316 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 THBS3P49746 956 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 IDI2-AS1Q9NZ38 188 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 C9JCJ5 164 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 FNDC10F2Z333 226 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 OR4A8P0C604 315 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 ADMP35318 185 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 TAS2R60P59551 318 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 RPL31P62899 125 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR20EP86478 221 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR20CP86479 221 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR20DP86480 221 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR20BP86481 221 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR20AP86496 221 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 TCF23Q7RTU1 214 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 FAM57AQ8TBR7 257 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 WFIKKN1Q96NZ8 548 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 RAB9BQ9NP90 201 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
CLCNKA-203ENST00000439316 TRGV10A0A0A0MS01 117 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 A0A1B0GUS0 222 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 K7EN84 100 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 MT-CO2P00403 227 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 CA2P00918 260 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 RAB4BP61018 213 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 SELENOTP62341 195 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 RAB31Q13636 194 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 PRR30Q53SZ7 412 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 C1orf185Q5T7R7 199 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 NEUROG1Q92886 237 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 SFXN3Q9BWM7 321 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 FKBP11Q9NYL4 201 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 IL36BQ9NZH7 164 aa13.44□□□□□ -0.26
CLCNKA-203ENST00000439316 KBTBD11-OT1A0A1B0GTJ5 212 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 SELLP14151 372 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 AREGP15514 252 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 HNF1AP20823 631 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ZNF83P51522 516 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ZNF439Q8NDP4 499 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 FAM222BQ8WU58 562 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ADTRPQ96IZ2 230 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ENY2Q9NPA8 101 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ARL2-SNX15V9GYD0 113 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 NBASA2RRP1 2371 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 NUPR1O60356 82 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 FOXH1O75593 365 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 RNF224P0DH78 156 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 IGFBP2P18065 325 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ITLN1Q8WWA0 313 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 ZCCHC14Q8WYQ9 949 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 SLC25A10Q9UBX3 287 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-203ENST00000439316 LINC00869P0C866 280 aa13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 NDUFB7P17568 137 aa13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 KLF3P57682 345 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 MRPS11P82912 194 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 HLA-DRB5Q30154 266 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms