RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MRPL41Q8IXM3 137 aaKnown RBP11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 FAM222BQ8WU58 562 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 PARLQ9H300 379 aa11.41□□□□□ -0.58
PTCHD3-201ENST00000438700 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 F2RL2O00254 374 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 SIAH2O43255 324 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 TGOLN2O43493 480 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 HPRT1P00492 218 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 IRF2P14316 349 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 TNFRSF1AP19438 455 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 C17orf58Q2M2W7 97 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 P2RX4Q99571 388 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 CCL13Q99616 98 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 OR6C3Q9NZP0 311 aa11.4□□□□□ -0.58
PTCHD3-201ENST00000438700 GYPAP02724 150 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 CR1LQ2VPA4 569 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 OR4A16Q8NH70 328 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 S1PR3Q99500 378 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 DYNLRB1Q9NP97 96 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.59
PTCHD3-201ENST00000438700 KBTBD11O94819 623 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 CHRNA7P36544 502 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 LBHQ53QV2 105 aaPredicted RBP11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 STUMQ69YW2 141 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 BEND2Q8NDZ0 799 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 SAA2-SAA4A0A096LPE2 208 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 SAA2P0DJI9 122 aaPredicted RBP11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 GNG10P50151 68 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 ERVK-16P61578 105 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 COA6Q5JTJ3 125 aaKnown RBP11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 ZNF709Q8N972 641 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 OR4F5Q8NH21 305 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM170AQ8WVE7 144 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
PTCHD3-201ENST00000438700 TNCP24821 2201 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 SPTBN1Q01082 2364 aaKnown RBP11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 GCGP01275 180 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 TCF23Q7RTU1 214 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 CENPVQ7Z7K6 275 aaPredicted RBP11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 OR5B12Q96R08 314 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM140Q9NV12 185 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 TRGV10A0A0A0MS01 117 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 KBTBD11-OT1A0A1B0GTJ5 212 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 SCGB1D1O95968 90 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 CGB3P0DN86 165 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 CGB7P0DN87 165 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 UQCRFS1P47985 274 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 SDSLQ96GA7 329 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM68Q96MH6 324 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 GAFA1Q96PS6 74 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 HEYLQ9NQ87 328 aaPredicted RBP11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 ABCA4P78363 2273 aa11.38□□□□□ -0.59
PTCHD3-201ENST00000438700 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 A6NNC1 897 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 RRHO14718 337 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 MMP23AO75900 390 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 IFNA1P01562 189 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 NPPCP23582 126 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 PDLIM4P50479 330 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 GCSAMLQ5JQS6 135 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 ZNRD1Q9P1U0 126 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 CTXND1A0A1B0GTU2 59 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 HRASP01112 189 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 ZNF25P17030 456 aaPredicted RBP11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 CD1BP29016 333 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 EFNB3Q15768 340 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 VWC2Q2TAL6 325 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 TDRG1Q3Y452 100 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 ACTL10Q5JWF8 245 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
PTCHD3-201ENST00000438700 TMPRSS2O15393 492 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 PAGE4O60829 102 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 RELBQ01201 579 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 DDB2Q92466 427 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 TMEM18Q96B42 140 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 B9A039 149 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 GNLYP22749 145 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 RAB7AP51149 207 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 FAM78BQ5VT40 261 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 OR4S2Q8NH73 311 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 CCL17Q92583 94 aa11.36□□□□□ -0.59
PTCHD3-201ENST00000438700 MS4A5Q9H3V2 200 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms