RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 COX7A2LO14548 114 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 NPFFO15130 113 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 SCO1O75880 301 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 PPP1R3DO95685 299 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 IGLV3-27P01718 113 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 GPX1P07203 203 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 INAFM2P0DMQ5 153 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 SCGB1C2P0DMR2 95 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 TDGF1P13385 188 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 IMPA1P29218 277 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 INSL3P51460 131 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 GABARAPL2P60520 117 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 HERVK_113P61574 105 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF141Q15928 474 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 RSPO1Q2MKA7 263 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ORMDL2Q53FV1 153 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 PABPC1L2AQ5JQF8 200 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 CASC10Q5T4H9 136 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 LYRM7Q5U5X0 104 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM244Q5VVB8 128 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 FAAP20Q6NZ36 180 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM14EPQ6UXP3 125 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 MDP1Q86V88 176 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 PRR15Q8IV56 129 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 CTAGE3PQ8IX95 158 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 C11orf42Q8N5U0 333 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF645Q8N7E2 425 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 SCGB1C1Q8TD33 95 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 RTN4IP1Q8WWV3 396 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 BORCS8Q96FH0 119 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ABHD14BQ96IU4 210 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 TEX37Q96LM6 180 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 DERL3Q96Q80 235 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 PEBP4Q96S96 227 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 NAA38Q9BRA0 125 aaKnown RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 IMUPQ9GZP8 106 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 WDR61Q9GZS3 305 aaKnown RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 AICDAQ9GZX7 198 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 EFCAB1Q9HAE3 211 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 DHRS4-AS1Q9P1J3 65 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 NAT8Q9UHE5 227 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 NUFIP1Q9UHK0 495 aaKnown RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 BOKQ9UMX3 212 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 TROQ12816 1431 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 SAMD9LQ8IVG5 1584 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 SETD1AO15047 1707 aaKnown RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 CDC42BPBQ9Y5S2 1711 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 NAV1Q8NEY1 1877 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 RPRD2Q5VT52 1461 aaKnown RBP2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 IQGAP3Q86VI3 1631 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 MROH1Q8NDA8 1641 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ADAMTSL1Q8N6G6 1762 aa2.64□□□□□ -1.99
HMGB1P12-201ENST00000438594 ABCC1P33527 1531 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 PRDM15P57071 1507 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 GPATCH8Q9UKJ3 1502 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 DAPK1P53355 1430 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 SPATA31E1Q6ZUB1 1445 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM212A6NML5 194 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 A8MXK9 166 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 B4DEV8 164 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 H0YJW9 148 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 J3QR89 54 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 LTAP01374 205 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 HLA-DQB1P01920 261 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 APODP05090 189 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF728P0DKX0 622 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 HLA-EP13747 358 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 RAB5CP51148 216 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 RBM11P57052 281 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 EIF3IQ13347 325 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 ELOCQ15369 112 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 RTL8BQ17RB0 113 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM241Q24JQ0 296 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 SP6Q3SY56 376 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 BCL2L15Q5TBC7 163 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 GLT8D1Q68CQ7 371 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 CEMP1Q6PRD7 247 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR5A2Q8NGI9 324 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 OR1J4Q8NGS1 313 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 MRPL30Q8TCC3 161 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 PP6455Q8WZ26 134 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 MS4A6EQ96DS6 147 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF799Q96GE5 643 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 TIMM17AQ99595 171 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 MRPL57Q9BQC6 102 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 PARP12Q9H0J9 701 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM133Q9H2Q1 129 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 SND1-IT1Q9HBX3 110 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZNF492Q9P255 531 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 GREB1LQ9C091 1923 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 EIF2AK4Q9P2K8 1649 aaKnown RBP2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 MED14O60244 1454 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 CAMSAP2Q08AD1 1489 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 ZFYVE16Q7Z3T8 1539 aa2.63□□□□□ -1.99
HMGB1P12-201ENST00000438594 TMEM2Q9UHN6 1383 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 KDM5CP41229 1560 aa2.62□□□□□ -1.99
HMGB1P12-201ENST00000438594 DISP2A7MBM2 1401 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms