RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TMEM30BQ3MIR4 351 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 Q6P435 159 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 AGMATQ9BSE5 352 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 MRPL32Q9BYC8 188 aaKnown RBP5.59□□□□□ -1.51
CSDE1-205ENST00000438362 DOCK10Q96BY6 2186 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 YPEL1O60688 119 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 IL18BPO95998 194 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 TFF1P04155 84 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 OR5AL1P0C617 328 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RIGQ13278 110 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 TCF23Q7RTU1 214 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 C11orf42Q8N5U0 333 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 CYYR1Q96J86 154 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 YPEL2Q96QA6 119 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RASL11BQ9BPW5 248 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 GNB4Q9HAV0 340 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 PRDM6Q9NQX0 595 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 RNF115Q9Y4L5 304 aa5.59□□□□□ -1.51
CSDE1-205ENST00000438362 CADP27708 2225 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV3-21A0A0B4J1V1 117 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV2OR16-5A0A0B4J2B6 119 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 RBFOX2O43251 390 aaKnown RBP eCLIP5.59□□□□□ -1.523e-6■■■■□ 22.3
CSDE1-205ENST00000438362 OR9G9P0C7N8 305 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 MC5RP33032 325 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 GPX4P36969 197 aaPredicted RBP5.59□□□□□ -1.52
CSDE1-205ENST00000438362 TNFSF10P50591 281 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 FOXF2Q12947 444 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 MORN2Q502X0 79 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF585BQ52M93 769 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 ASCL5Q7RTU5 278 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.59□□□□□ -1.52
CSDE1-205ENST00000438362 FDCSPQ8NFU4 85 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 OCC1Q8TAD7 63 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF596Q8TC21 504 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 RNF138Q8WVD3 245 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 NPIPB3Q92617 1050 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 SSBP3Q9BWW4 388 aaPredicted RBP5.59□□□□□ -1.52
CSDE1-205ENST00000438362 TNFRSF19Q9NS68 423 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 ONECUT1Q9UBC0 465 aa5.59□□□□□ -1.52
CSDE1-205ENST00000438362 PKDREJQ9NTG1 2253 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TCF21O43680 179 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 SERF1AO75920 110 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 C1orf185Q5T7R7 199 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 HCP5Q6MZN7 132 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 C19orf35Q6ZS72 473 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 MIR17HGQ75NE6 70 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 LINC01551Q86U37 167 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 ATG101Q9BSB4 218 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM106BQ9NUM4 274 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 WASHC3Q9Y3C0 194 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 WNK2Q9Y3S1 2297 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TEX50A0A1B0GTY4 177 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 SLC25A17O43808 307 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 NTF4P34130 210 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 ADMP35318 185 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 CA7P43166 264 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TEX38Q6PEX7 206 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM144Q7Z5S9 345 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 FAM90A1Q86YD7 464 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 DIRC2Q96SL1 478 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-205ENST00000438362 IFI27L2Q9H2X8 130 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 LTBP2Q14767 1821 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV3-72A0A0B4J1Y9 119 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 KBTBD11-OT1A0A1B0GTJ5 212 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 CBY3A6NI87 242 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 NCBP2LA6PVI3 153 aaKnown RBP5.58□□□□□ -1.52
CSDE1-205ENST00000438362 SS18L1O75177 396 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-205ENST00000438362 ANOS1P23352 680 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 CTAG1AP78358 180 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 FAM201AQ5SY85 155 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TREML4Q6UXN2 200 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 PLA2G2EQ9NZK7 142 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 THYN1Q9P016 225 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 HIGD1AQ9Y241 93 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 TBL2Q9Y4P3 447 aaKnown RBP5.58□□□□□ -1.52
CSDE1-205ENST00000438362 CACNA1HO95180 2353 aa5.58□□□□□ -1.52
CSDE1-205ENST00000438362 ABCA1O95477 2261 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 ACACAQ13085 2346 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 DPRXA6NFQ7 191 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 FAM90A9PA6NNJ1 464 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 C15orf61A6NNL5 157 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 SIAH2O43255 324 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 GNG7O60262 68 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV3-48P01763 117 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV2-70P01814 119 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 STAG3L2P0CL84 134 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 STAG3L3P0CL85 134 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 FOXL1Q12952 345 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 TIMM23BQ5SRD1 257 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 DNLZQ5SXM8 178 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-205ENST00000438362 GGTLC1Q9BX51 225 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 PPP1R14DQ9NXH3 145 aa5.57□□□□□ -1.52
CSDE1-205ENST00000438362 PCNX3Q9H6A9 2034 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms