RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 NPPCP23582 126 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 MPV17P39210 176 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 SIGLEC14Q08ET2 396 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 P2RY6Q15077 328 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 WDR82Q6UXN9 313 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 FER1L6-AS1Q8NA97 138 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 CXCL16Q9H2A7 254 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 SBF1O95248 1867 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 CRPP02741 224 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 ADMP35318 185 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 CACNG8Q8WXS5 425 aa9.88□□□□□ -0.83
PTCH1-209ENST00000437951 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 UNC119Q13432 240 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 OR4D11Q8NGI4 311 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 RPRMQ9NS64 109 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 hCG_38984A0A1B0GV85 526 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 GZMMP51124 257 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 ST6GALNAC6Q969X2 333 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 OR2H2O95918 312 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 PEX11BO96011 259 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 LIMS1P48059 325 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 RNASEH2CQ8TDP1 164 aaKnown RBP9.87□□□□□ -0.83
PTCH1-209ENST00000437951 ASCL2Q99929 193 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 PATJQ8NI35 1801 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 SPTAN1Q13813 2472 aaKnown RBP9.87□□□□□ -0.83
PTCH1-209ENST00000437951 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-209ENST00000437951 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 TMEM8BA6NDV4 472 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 DXOO77932 396 aaKnown RBP9.87□□□□□ -0.83
PTCH1-209ENST00000437951 SCTP09683 121 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 CBLN3Q6UW01 205 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 MS4A4AQ96JQ5 239 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 EPDR1Q9UM22 224 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
PTCH1-209ENST00000437951 CCL20P78556 96 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 Q96M66 194 aa9.87□□□□□ -0.83
PTCH1-209ENST00000437951 LDLRAD4O15165 306 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 LOXL4Q96JB6 756 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 FAM74A4Q5TZK3 123 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 TCF19Q9Y242 345 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF362Q5T0B9 420 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 STRCQ7RTU9 1775 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 SLC25A38Q96DW6 304 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 PRDM14Q9GZV8 571 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 F2Z2F3 143 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 ZG16O60844 167 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 IL6RP08887 468 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 TRPM3Q9HCF6 1732 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 GAGE12BA1L429 117 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 NBEAP1P0C6P0 100 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 LINC01555Q8NAE3 123 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 ST6GALNAC3Q8NDV1 305 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 COX14Q96I36 57 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 TRBV24-1A0A075B6N3 115 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 J3QW42 95 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 IGHMP01871 453 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 PCSK4Q6UW60 755 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 SSBP3Q9BWW4 388 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-209ENST00000437951 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
PTCH1-209ENST00000437951 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 C21orf140B9A014 251 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 MLNRO43193 412 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 SOX8P57073 446 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 VWC2LB2RUY7 222 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 SNAI2O43623 268 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 UMODP07911 640 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 CT62P0C5K7 136 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
PTCH1-209ENST00000437951 MRPL20Q9BYC9 149 aaKnown RBP9.85□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF703Q9H7S9 590 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-209ENST00000437951 LIFP15018 202 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 ZNF415Q09FC8 603 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 LRP5O75197 1615 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 RASL10BQ96S79 203 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 C1orf185Q5T7R7 199 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 CCL27Q9Y4X3 112 aa9.85□□□□□ -0.83
PTCH1-209ENST00000437951 TRAV12-3A0A0B4J271 114 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 NPIPB13A6NJU9 1138 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 OR9G9P0C7N8 305 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 SIRT4Q9Y6E7 314 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-209ENST00000437951 TRAV24A0A0B4J272 114 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 NPIPB11E5RHQ5 1161 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 COX5BP10606 129 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 CALYQ9NYX4 217 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 SIPA1L3O60292 1781 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-209ENST00000437951 IGHV3-21A0A0B4J1V1 117 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 PAPPA2Q9BXP8 1791 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 TOMM40O96008 361 aa9.84□□□□□ -0.83
PTCH1-209ENST00000437951 APELAP0DMC3 54 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms