RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 FBXL17Q9UF56 701 aa8.74□□□□□ -1.01
HMGCL-204ENST00000436439 RCL1Q9Y2P8 373 aaKnown RBP8.74□□□□□ -1.01
HMGCL-204ENST00000436439 A0A1W2PPI3 338 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 MARCH11A6NNE9 402 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 PITX3O75364 302 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 HRASP01112 189 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 NQO2P16083 231 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 AKR1C2P52895 323 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 LGALS4P56470 323 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 OR2B11Q5JQS5 317 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
HMGCL-204ENST00000436439 CCDC144NLQ6NUI1 221 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 UBAC2Q8NBM4 344 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 DMBX1Q8NFW5 382 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 OR4C13Q8NGP0 309 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 FAM110DQ8TAY7 271 aaPredicted RBP8.73□□□□□ -1.01
HMGCL-204ENST00000436439 TMED6Q8WW62 240 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
HMGCL-204ENST00000436439 SLC25A31Q9H0C2 315 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 ARV1Q9H2C2 271 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 SIGLEC9Q9Y336 463 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 WASHC3Q9Y3C0 194 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 A0A0G2JRQ6 117 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 RAB19A4D1S5 217 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 BTBD17A6NE02 478 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 H3BUX3 64 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 CRYZL1O95825 349 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 KRASP01116 189 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
HMGCL-204ENST00000436439 CD1BP29016 333 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 G6PCP35575 357 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 REG1BP48304 166 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 VAMP2P63027 116 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 ID3Q02535 119 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 AARDQ4LEZ3 155 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 UQCC3Q6UW78 93 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 GPR146Q96CH1 333 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 R3HDM4Q96D70 268 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 RNF5Q99942 180 aa8.73□□□□□ -1.01
HMGCL-204ENST00000436439 PLXNB1O43157 2135 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 IGKV1-16P04430 117 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 SULT1A2P50226 295 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 ERVK-16P61578 105 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 LY6EQ16553 131 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 LHFPL4Q7Z7J7 247 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 STPG2Q8N412 459 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 OR2C3Q8N628 320 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 RNASE11Q8TAA1 199 aaKnown RBP8.72□□□□□ -1.01
HMGCL-204ENST00000436439 CFHR4Q92496 578 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 FLYWCH2Q96CP2 140 aaKnown RBP8.72□□□□□ -1.01
HMGCL-204ENST00000436439 RHOVQ96L33 236 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 SSX3Q99909 188 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
HMGCL-204ENST00000436439 FAM90A26D6RGX4 464 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 TEX46H3BTG2 121 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 H7C2Y5 167 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 WRBO00258 174 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 SEC11BP0C7V7 166 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 LGALS7P47929 136 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 BLOC1S1P78537 153 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 EWSR1Q01844 656 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGCL-204ENST00000436439 BAXQ07812 192 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 IL34Q6ZMJ4 242 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 Q6ZRM9 215 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 MOB3BQ86TA1 216 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 PUSL1Q8N0Z8 303 aaKnown RBP8.71□□□□□ -1.02
HMGCL-204ENST00000436439 SMIM8Q96KF7 97 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 GINS3Q9BRX5 216 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 MEGF9Q9H1U4 602 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 LYRM2Q9NU23 88 aaPredicted RBP8.71□□□□□ -1.02
HMGCL-204ENST00000436439 BET1LQ9NYM9 111 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 NOTCH1P46531 2555 aa8.71□□□□□ -1.02
HMGCL-204ENST00000436439 ZNF705EA8MWA4 302 aaPredicted RBP8.7□□□□□ -1.02
HMGCL-204ENST00000436439 SSSCA1O60232 199 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 POLR2GP62487 172 aaKnown RBP eCLIP8.7□□□□□ -1.02
HMGCL-204ENST00000436439 EBI3Q14213 229 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 ZNF266Q14584 549 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 CXorf66Q5JRM2 361 aaPredicted RBP8.7□□□□□ -1.02
HMGCL-204ENST00000436439 ZNF429Q86V71 674 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 DYNAPQ8N1N2 210 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 C11orf44Q8N8P7 122 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 OR1S2Q8NGQ3 325 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 OR4A5Q8NH83 315 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 VSTM2AQ8TAG5 236 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 PIFOQ8TCI5 191 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 HARBI1Q96MB7 349 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 LINC00052Q96N35 136 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 SMIM3Q9BZL3 60 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.7□□□□□ -1.02
HMGCL-204ENST00000436439 TMEM140Q9NV12 185 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 CACNG5Q9UF02 275 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 HILPDAQ9Y5L2 63 aa8.7□□□□□ -1.02
HMGCL-204ENST00000436439 IGSF23A1L1A6 192 aa8.69□□□□□ -1.02
HMGCL-204ENST00000436439 SRRM4A7MD48 611 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms