RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 INS-IGF2F8WCM5 200 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 IGHV2-70P01814 119 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 DEFA4P12838 97 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 NBL1P41271 181 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 RPL31P62899 125 aaKnown RBP8.52□□□□□ -1.05
CD44-210ENST00000434472 FOXL1Q12952 345 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 C22orf34Q6ZV56 151 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 LINC00311Q8N616 119 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 PRSS33Q8NF86 280 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 RNF2Q99496 336 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
CD44-210ENST00000434472 A0A1W2PN81 502 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 TMEM178BH3BS89 294 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 NDUFB3O43676 98 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 MMP23AO75900 390 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 LINC00869P0C866 280 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 SAA1P0DJI8 122 aaPredicted RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 FABP4P15090 132 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 IGFBP2P18065 325 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 CHRNA7P36544 502 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 TAS2R45P59539 299 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 CCL8P80075 99 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 LRRC10Q5BKY1 277 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 GFRALQ6UXV0 394 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 PDPNQ86YL7 162 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 VSTM2AQ8TAG5 236 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 ZNF596Q8TC21 504 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 TMEM186Q96B77 213 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 SFRP2Q96HF1 295 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 ELOVL1Q9BW60 279 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 SAP30LQ9HAJ7 183 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 TECRQ9NZ01 308 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 ZNF835Q9Y2P0 537 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 HCFC1P51610 2035 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 C9JCJ5 164 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 DVL1O14640 695 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 THBDP07204 575 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 USF1P22415 310 aaPredicted RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 PDLIM4P50479 330 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 RBPJQ06330 500 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 BSPH1Q075Z2 132 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 OR4P4Q8NGL7 312 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 OR10G8Q8NGN5 311 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 TMEM167AQ8TBQ9 72 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 RNASEH2CQ8TDP1 164 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 HARBI1Q96MB7 349 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 NABP2Q9BQ15 211 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 MRPL20Q9BYC9 149 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 TMEM106BQ9NUM4 274 aa8.51□□□□□ -1.05
CD44-210ENST00000434472 YTHDF2Q9Y5A9 579 aaKnown RBP8.51□□□□□ -1.05
CD44-210ENST00000434472 CACNA1HO95180 2353 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 ZNF320A2RRD8 509 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 H0YJW9 148 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 TNFRSF13BO14836 293 aaPredicted RBP8.5□□□□□ -1.05
CD44-210ENST00000434472 HIST1H1BP16401 226 aaKnown RBP8.5□□□□□ -1.05
CD44-210ENST00000434472 IL3RAP26951 378 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 CD69Q07108 199 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 SPATA31B1PQ5VZV4 182 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 PQLC2Q6ZP29 291 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 FLYWCH2Q96CP2 140 aaKnown RBP8.5□□□□□ -1.05
CD44-210ENST00000434472 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 LRFN3Q9BTN0 628 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 MRPL32Q9BYC8 188 aaKnown RBP8.5□□□□□ -1.05
CD44-210ENST00000434472 SEPSECSQ9HD40 501 aaKnown RBP8.5□□□□□ -1.05
CD44-210ENST00000434472 DCAF16Q9NXF7 216 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 PRR14LQ5THK1 2151 aa8.5□□□□□ -1.05
CD44-210ENST00000434472 DOCK11Q5JSL3 2073 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 TANC2Q9HCD6 1990 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 ZNF318Q5VUA4 2279 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 SRRM4A7MD48 611 aaKnown RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 IGKV1-16P04430 117 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 C1QTNF9P0C862 333 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 MYOD1P15172 320 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 MC5RP33032 325 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 SUB1P53999 127 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD44-210ENST00000434472 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 GAMTQ14353 236 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 MIR17HGQ75NE6 70 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms