RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SMIM30A4D0T7 59 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 J3QR06 171 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 P0C879 139 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DEFA4P12838 97 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HBBP68871 147 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 RUNX1Q01196 453 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TLE1Q04724 770 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 OR10J3Q5JRS4 329 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ZNF818PQ6ZRF7 136 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DEPPQ9NTK1 212 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HLA-DRB1P01911 266 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 SUMO1P63165 101 aaKnown RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 CST9LP1Q5W188 147 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 GTF2H5Q6ZYL4 71 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 USMG5Q96IX5 58 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 DNAJC4Q9NNZ3 241 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 NXT2Q9NPJ8 142 aaKnown RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 OR51B2Q9Y5P1 312 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 A6NL46 340 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 M0R1X1 148 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 HSBP1O75506 76 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TRGC1P0CF51 173 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 ESDP10768 282 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 APOBEC3AP31941 199 aaPredicted RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TCF23Q7RTU1 214 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 GNG13Q9P2W3 67 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 TMA7Q9Y2S6 64 aaKnown RBP3.16□□□□□ -1.9
SHPRH-205ENST00000433355 CBY1Q9Y3M2 126 aa3.16□□□□□ -1.9
SHPRH-205ENST00000433355 AKAP13Q12802 2813 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.15□□□□□ -1.9
SHPRH-205ENST00000433355 TRAV24A0A0B4J272 114 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 NUPL2O15504 423 aaKnown RBP3.15□□□□□ -1.9
SHPRH-205ENST00000433355 OR7C2O60412 319 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 KLRB1Q12918 225 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 FGFRL1Q8N441 504 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 RNASE6Q93091 150 aaKnown RBP3.15□□□□□ -1.9
SHPRH-205ENST00000433355 SPXQ9BT56 116 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 RPP25Q9BUL9 199 aaKnown RBP3.15□□□□□ -1.9
SHPRH-205ENST00000433355 EDDM3BP56851 147 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 OR4A47Q6IF82 309 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 ATG101Q9BSB4 218 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 GCM1Q9NP62 436 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 OR4C46A6NHA9 309 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 J3QLI3 93 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 CHST1O43916 411 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 OR11H4Q8NGC9 324 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 OR5AN1Q8NGI8 311 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 PYGO2Q9BRQ0 406 aa3.15□□□□□ -1.9
SHPRH-205ENST00000433355 CHEK1O14757 476 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 MOSP00540 346 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PLATP00750 562 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 P01737 135 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 AMY1AP04745 511 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 OR9G9P0C7N8 305 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 OR3A1P47881 315 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM217Q8N7C4 229 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 OR10C1Q96KK4 312 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 VAMP8Q9BV40 100 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF71Q9NQZ8 489 aaPredicted RBP3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PSG11Q9UQ72 335 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PGPEP1LA6NFU8 196 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 DYNLT3P51808 116 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 RBPMS2Q6ZRY4 209 aaKnown RBP3.15□□□□□ -1.91
SHPRH-205ENST00000433355 ZNF525Q8N782 197 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 C8orf46Q8TAG6 207 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 TEX50A0A1B0GTY4 177 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 HNF1AP20823 631 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PLP1P60201 277 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 SLC35B1P78383 322 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 SPANXN5Q5MJ07 72 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM230Q96A57 120 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 TMEM133Q9H2Q1 129 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 CECR9P0C854 216 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 C1QTNF9P0C862 333 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 NECAP1Q8NC96 275 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 SNRNP40Q96DI7 357 aaKnown RBP3.15□□□□□ -1.91
SHPRH-205ENST00000433355 AMELYQ99218 206 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 REG4Q9BYZ8 158 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 MAP1AP78559 2803 aaPredicted RBP3.15□□□□□ -1.91
SHPRH-205ENST00000433355 C7orf71A4D174 169 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 FCN1O00602 326 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 CA2P00918 260 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 CELA2BP08218 269 aaPredicted RBP3.15□□□□□ -1.91
SHPRH-205ENST00000433355 SUMF1Q8NBK3 374 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 C2CD4CQ8TF44 421 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 MS4A10Q96PG2 267 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 FSCN3Q9NQT6 498 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PLA2G3Q9NZ20 509 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 DPM3Q9P2X0 92 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 CACNG7P62955 275 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 SEC11AP67812 179 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 PIK3CD-AS1Q5SR53 167 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 C20orf144Q9BQM9 153 aa3.15□□□□□ -1.91
SHPRH-205ENST00000433355 IGHV3-20A0A0C4DH32 117 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 TCRBV4S1A1TA0A5B7 111 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 C17orf100A8MU93 164 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 CDAP32320 146 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 ERVFC1-1P60608 527 aa3.14□□□□□ -1.91
SHPRH-205ENST00000433355 Q0VG73 95 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms