RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CGB1A6NKQ9 187 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 MARCH11A6NNE9 402 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 SEC14L6B5MCN3 397 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TEX22C9J3V5 150 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 LINC01619G3V211 115 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF701M0R085 212 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 RBFOX2O43251 390 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 GSTZ1O43708 216 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 SNAPC5O75971 98 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 NDUFB8O95169 186 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGKV1-39P01597 117 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGKV1D-39P04432 117 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 HSPB1P04792 205 aaKnown RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 SERPINE2P07093 398 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR8U8P0C7N1 319 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRAPPC2P0DI81 140 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRAPPC2BP0DI82 140 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 DEFA4P12838 97 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 AKR1C4P17516 323 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TBPP20226 339 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 PSMB6P28072 239 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC6A1P30531 599 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 MECP2P51608 486 aaKnown RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR2B8PP59922 312 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 RHOGP84095 191 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRIM16LQ309B1 348 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF57Q68EA5 555 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC25A24Q6NUK1 477 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 H2BFWTQ7Z2G1 175 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 CCDC190Q86UF4 302 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 Q8N402 240 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TOMM5Q8N4H5 51 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 ADAD2Q8NCV1 583 aaKnown RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR6Q1Q8NGQ2 317 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 MRGPRFQ96AM1 343 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 TP53RKQ96S44 253 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 RTBDNQ9BSG5 229 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 RANGRFQ9HD47 186 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 AKIP1Q9NQ31 210 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 NDUFA13Q9P0J0 144 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 PEF1Q9UBV8 284 aaKnown RBP4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 GPR132Q9UNW8 380 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR51B2Q9Y5P1 312 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 V9GYH0 126 aa4.45□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGHV3-21A0A0B4J1V1 117 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 DBX1A6NMT0 343 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 PPP5D1E7EU14 171 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 H3BUA1 57 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 OVOL1O14753 267 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 SAP30O75446 220 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 DUS4LO95620 317 aaKnown RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRBV12-3P01733 135 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 CTSDP07339 412 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR5AC1P0C628 307 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR13C7P0DN81 318 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 ETV6P41212 452 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 INPP1P49441 399 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF79Q15937 498 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 BAK1Q16611 211 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 C15orf32Q32M92 178 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 SPINK9Q5DT21 86 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 SPANXN2Q5MJ10 180 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 CCDC71LQ8N9Z2 235 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 RNASE11Q8TAA1 199 aaKnown RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZNF486Q96H40 463 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 SEC22AQ96IW7 307 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 USMG5Q96IX5 58 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 PRRT1Q99946 306 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 C5orf66Q9H5L9 145 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 ZC4H2Q9NQZ6 224 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 COMMD9Q9P000 198 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 SCP2D1Q9UJQ7 156 aa4.44□□□□□ -1.7
HMGB3P24-201ENST00000433260 WNK1Q9H4A3 2382 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 H0Y980 276 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 NXPH3O95157 252 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 OR2C1O95371 312 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 DHFRP00374 187 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGKV1-5P01602 117 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 HLA-AP01891 365 aaKnown RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 CRYGCP07315 174 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 CTRB1P17538 263 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 AKR1C2P52895 323 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 SYNJ2BPP57105 145 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 RND3P61587 244 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 RUNX1Q01196 453 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 WT1-ASQ06250 92 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 FHL3Q13643 280 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 EXOSC2Q13868 293 aaKnown RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
HMGB3P24-201ENST00000433260 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms