RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 CD3EP07766 207 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 STAG3L2P0CL84 134 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 STAG3L3P0CL85 134 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 SAA1P0DJI8 122 aaPredicted RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 CCL3L1P16619 93 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 S100PP25815 95 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 RPL23P62829 140 aaKnown RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 EFNB3Q15768 340 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 ARSJQ5FYB0 599 aaPredicted RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 GCSAMLQ5JQS6 135 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 TMEM186Q96B77 213 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 HARBI1Q96MB7 349 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 OR5B12Q96R08 314 aa11.18□□□□□ -0.62
THBS3-202ENST00000428962 MRPL20Q9BYC9 149 aaKnown RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 PATZ1Q9HBE1 687 aaKnown RBP11.18□□□□□ -0.62
THBS3-202ENST00000428962 TET2Q6N021 2002 aaPredicted RBP11.17□□□□□ -0.62
THBS3-202ENST00000428962 B9A039 149 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 E7EQL1 145 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 H0YJW9 148 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 MT-CO2P00403 227 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 FAM87AP0C7U9 286 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 DEFA4P12838 97 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 APOBEC3AP31941 199 aaPredicted RBP11.17□□□□□ -0.62
THBS3-202ENST00000428962 RHOBP62745 196 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 PDPNQ86YL7 162 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 DMRTC2Q8IXT2 367 aaPredicted RBP11.17□□□□□ -0.62
THBS3-202ENST00000428962 VSTM2AQ8TAG5 236 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 ZNF596Q8TC21 504 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 NEUROG1Q92886 237 aa11.17□□□□□ -0.62
THBS3-202ENST00000428962 H7BYZ3 331 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 ARL14EPLP0DKL9 152 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 TMEM177Q53S58 311 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 STPG3Q8N7X2 389 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 OR1L8Q8NGR8 309 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 SSMEM1Q8WWF3 244 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 ZGRF1Q86YA3 2104 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 ZFYVE26Q68DK2 2539 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 IGHV1-69-2A0A0G2JMI3 117 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 TEX50A0A1B0GTY4 177 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 DVL1O14640 695 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 USF1P22415 310 aaPredicted RBP11.16□□□□□ -0.62
THBS3-202ENST00000428962 IL3RAP26951 378 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 OR4C13Q8NGP0 309 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 FLYWCH2Q96CP2 140 aaKnown RBP11.16□□□□□ -0.62
THBS3-202ENST00000428962 COMMD5Q9GZQ3 224 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
THBS3-202ENST00000428962 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
THBS3-202ENST00000428962 FOSL1P15407 271 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.62
THBS3-202ENST00000428962 UBE2G2P60604 165 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 LYPD2Q6UXB3 125 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 PCGF1Q9BSM1 259 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 DOK5Q9P104 306 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
THBS3-202ENST00000428962 SPENQ96T58 3664 aaKnown RBP11.14□□□□□ -0.63
THBS3-202ENST00000428962 A0A087X0M5 115 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 A0A1B0GX30 115 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 A0A1W2PN81 502 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 CLN5O75503 358 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 FCN3O75636 299 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 MYOD1P15172 320 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 CHRNA7P36544 502 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 GALR1P47211 349 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 ZNF137PP52743 207 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
THBS3-202ENST00000428962 ERHP84090 104 aaKnown RBP11.14□□□□□ -0.63
THBS3-202ENST00000428962 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 OR9G1Q8NH87 305 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 SSX3Q99909 188 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 TMEM204Q9BSN7 226 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
THBS3-202ENST00000428962 TRGC2P03986 189 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 CD99P14209 185 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 IGFBP2P18065 325 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 HOXA5P20719 270 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 GCHFRP30047 84 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 ATP5G3P48201 142 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 PRR20EP86478 221 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 PRR20CP86479 221 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 PRR20DP86480 221 aa11.14□□□□□ -0.63
THBS3-202ENST00000428962 PRR20BP86481 221 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms