RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LTBP2Q14767 1821 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 IGHV3-35A0A0C4DH35 117 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 CXCL1P09341 107 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 FAM157CP0CG43 387 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 AMTP48728 403 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 DEFB121Q5J5C9 76 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 RBPMS2Q6ZRY4 209 aaKnown RBP8.93□□□□□ -0.98
TCOF1-204ENST00000427724 CIB3Q96Q77 187 aaPredicted RBP8.93□□□□□ -0.98
TCOF1-204ENST00000427724 TP53RKQ96S44 253 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 RSG1Q9BU20 258 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 ACTR3CQ9C0K3 210 aaPredicted RBP8.93□□□□□ -0.98
TCOF1-204ENST00000427724 NAGKQ9UJ70 344 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 OR2W1Q9Y3N9 320 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 FAM3BP58499 235 aaPredicted RBP8.93□□□□□ -0.98
TCOF1-204ENST00000427724 NRN1LQ496H8 165 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 SLC35E3Q7Z769 313 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 OR5P3Q8WZ94 311 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM222Q9H0R3 208 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 SMDT1Q9H4I9 107 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 CR1LQ2VPA4 569 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 GCSAMQ8N6F7 178 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 LYZL4Q96KX0 146 aa8.93□□□□□ -0.98
TCOF1-204ENST00000427724 REPIN1Q9BWE0 567 aaKnown RBP8.93□□□□□ -0.98
TCOF1-204ENST00000427724 TFF1P04155 84 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
TCOF1-204ENST00000427724 MC5RP33032 325 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 THBS3P49746 956 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 CNN1P51911 297 aaKnown RBP8.92□□□□□ -0.98
TCOF1-204ENST00000427724 TNFRSF9Q07011 255 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 ADIPOQQ15848 244 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM183AQ8IXX5 376 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 VAX2Q9UIW0 290 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 HECTD1Q9ULT8 2610 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 DBX1A6NMT0 343 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 NDUFS7O75251 213 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 OR10J4P0C629 311 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 BCL2P10415 239 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 CRISP2P16562 243 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 COL8A2P25067 703 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 SSTR5P35346 364 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 CALHM1Q8IU99 346 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 HIST3H2BBQ8N257 126 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 KLHDC1Q8N7A1 406 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
TCOF1-204ENST00000427724 FREM1Q5H8C1 2179 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 TNCP24821 2201 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 DUXBA0A1W2PPF3 345 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 FCN1O00602 326 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 RPL27AP46776 148 aaKnown RBP8.92□□□□□ -0.98
TCOF1-204ENST00000427724 CDPF1Q6NVV7 123 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 IL17RELQ6ZVW7 336 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 KCNIP2Q9NS61 270 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 FBLN5Q9UBX5 448 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 SORL1Q92673 2214 aa8.92□□□□□ -0.98
TCOF1-204ENST00000427724 NUP210Q8TEM1 1887 aaPredicted RBP8.92□□□□□ -0.98
TCOF1-204ENST00000427724 K7EQM0 130 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 ELOBQ15370 118 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 FFAR4Q5NUL3 377 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 HCP5Q6MZN7 132 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
TCOF1-204ENST00000427724 TM2D1Q9BX74 207 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 ARL2-SNX15V9GYD0 113 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 USP34Q70CQ2 3546 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 OBSL1O75147 1896 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 hCG_38984A0A1B0GV85 526 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 PITX3O75364 302 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 G6PCP35575 357 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 CCL20P78556 96 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 MST1LQ2TV78 715 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 ACP7Q6ZNF0 438 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 LINC01356Q8N9X3 169 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 HSPB9Q9BQS6 159 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 NAT8BQ9UHF3 227 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 IQCF6A8MYZ5 107 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 CEACAM4O75871 244 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 ORM2P19652 201 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 MPZP25189 248 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 KIR2DS2P43631 304 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 LYZP61626 148 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 DMRTC2Q8IXT2 367 aaPredicted RBP8.91□□□□□ -0.98
TCOF1-204ENST00000427724 OR8I2Q8N0Y5 310 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 OR5AU1Q8NGC0 362 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 MRPL30Q8TCC3 161 aaKnown RBP8.91□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM186Q96B77 213 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 TMEM147Q9BVK8 224 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 C1QTNF5Q9BXJ0 243 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 PRSS22Q9GZN4 317 aa8.91□□□□□ -0.98
TCOF1-204ENST00000427724 C2CD3Q4AC94 2353 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 SRP19P09132 144 aaKnown RBP8.9□□□□□ -0.98
TCOF1-204ENST00000427724 NUTF2P61970 127 aaKnown RBP8.9□□□□□ -0.98
TCOF1-204ENST00000427724 ZNF818PQ6ZRF7 136 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 COLCA1Q6ZS62 124 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 ITLN2Q8WWU7 325 aaPredicted RBP8.9□□□□□ -0.98
TCOF1-204ENST00000427724 HSBP1O75506 76 aa8.9□□□□□ -0.98
TCOF1-204ENST00000427724 TNFSF13O75888 250 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms