RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 hCG_1809904A0A1W2PP81 198 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A1W2PR64 198 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A1W2PRV1 198 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 SFTPCP11686 197 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 DLX1P56177 255 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR10W1Q8NGF6 305 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
APOBEC3D-202ENST00000427494 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 PAGE4O60829 102 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 LY6HO94772 140 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 B2MP61769 119 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 PRB3Q04118 309 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 PNRC1Q12796 327 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RAB31Q13636 194 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RNF212Q495C1 297 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR8B3Q8NGG8 313 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR1L8Q8NGR8 309 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RAB1CQ92928 201 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 FAM122AQ96E09 287 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR8B2Q96RD0 313 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 PPIAL4CA0A0B4J2A2 164 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 B4DEV8 164 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 FNDC10F2Z333 226 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 IGLV2-23P01705 113 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 PPIAL4GP0DN37 164 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RNASE2P10153 161 aaKnown RBP11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 IGFBP2P18065 325 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RAB5AP20339 215 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 RAB5BP61020 215 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 ZNF674Q2M3X9 581 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 SMIM7Q9BQ49 75 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 SDF2L1Q9HCN8 221 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 NDUFA4L2Q9NRX3 87 aa11.34□□□□□ -0.59
APOBEC3D-202ENST00000427494 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 IGHV3-72A0A0B4J1Y9 119 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 ENSAO43768 121 aaKnown RBP11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 MC5RP33032 325 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 PRRX1P54821 245 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 VMA21Q3ZAQ7 101 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 WDR25Q64LD2 544 aaPredicted RBP11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 TNFRSF14Q92956 283 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 RPUSD4Q96CM3 377 aaKnown RBP11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 YPEL4Q96NS1 127 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 MIOXQ9UGB7 285 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 ATRXP46100 2492 aa11.33□□□□□ -0.6
APOBEC3D-202ENST00000427494 ERHP84090 104 aaKnown RBP11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 HLA-DRB5Q30154 266 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 CLEC7AQ9BXN2 247 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 NAT8Q9UHE5 227 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 TNCP24821 2201 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 A0A1W2PN81 502 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 SLC25A17O43808 307 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 SOD3P08294 240 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 COX7A1P24310 79 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 MAS1LP35410 378 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 CHRNA7P36544 502 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 RPL29P47914 159 aaKnown RBP11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 C10orf55Q5SWW7 151 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 TIMD4Q96H15 378 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 RITA1Q96K30 269 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 ONECUT1Q9UBC0 465 aa11.32□□□□□ -0.6
APOBEC3D-202ENST00000427494 E7EUB6 86 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 IGLV1-47P01700 117 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 RBP4P02753 201 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 UBE2G2P60604 165 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 ABHD5Q8WTS1 349 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 PARLQ9H300 379 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 TPSG1Q9NRR2 321 aa11.31□□□□□ -0.6
APOBEC3D-202ENST00000427494 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms