RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 TRAPPC2BP0DI82 140 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 S100A5P33763 92 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-204ENST00000426878 FAAP20Q6NZ36 180 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 MARCH1Q8TCQ1 289 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 PRRT1Q99946 306 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 NDUFA4L2Q9NRX3 87 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 TMEM14BQ9NUH8 114 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 COPZ2Q9P299 210 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 V9GYH0 126 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 IGLV11-55A0A075B6I3 123 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 C3orf85A0A1B0GTC6 90 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 WI2-2373I1.2A0A1W2PRP0 233 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 EXOSC2Q13868 293 aaKnown RBP13.22□□□□□ -0.29
LMCD1-204ENST00000426878 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 C19orf35Q6ZS72 473 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 OR5B3Q8NH48 314 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 TP53RKQ96S44 253 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-204ENST00000426878 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 FBXL7Q9UJT9 491 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
LMCD1-204ENST00000426878 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.3
LMCD1-204ENST00000426878 C15orf61A6NNL5 157 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 TRBV12-3P01733 135 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 DEFA4P12838 97 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 ETV6P41212 452 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 RTBDNQ9BSG5 229 aaPredicted RBP13.21□□□□□ -0.3
LMCD1-204ENST00000426878 GPR132Q9UNW8 380 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 NSG2Q9Y328 171 aa13.21□□□□□ -0.3
LMCD1-204ENST00000426878 NDUFB8O95169 186 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 REG1AP05451 166 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 UCP1P25874 307 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 WT1-ASQ06250 92 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 GDPD1Q8N9F7 314 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 OR10W1Q8NGF6 305 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 LSM10Q969L4 123 aaKnown RBP13.2□□□□□ -0.3
LMCD1-204ENST00000426878 TRIM63Q969Q1 353 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 ELOVL1Q9BW60 279 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
LMCD1-204ENST00000426878 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
LMCD1-204ENST00000426878 SORL1Q92673 2214 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 DBX1A6NMT0 343 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 BMPR1BO00238 502 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 SAP30O75446 220 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 ATG12O94817 140 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 P0C879 139 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 ZNF79Q15937 498 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 TATDN3Q17R31 274 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 Q8N402 240 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 DEDD2Q8WXF8 326 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 OR4C12Q96R67 309 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 C5orf66Q9H5L9 145 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 DMRT1Q9Y5R6 373 aa13.19□□□□□ -0.3
LMCD1-204ENST00000426878 CYB5BO43169 146 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 AP3S2P59780 193 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 DCTN2Q13561 401 aaKnown RBP13.18□□□□□ -0.3
LMCD1-204ENST00000426878 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
LMCD1-204ENST00000426878 RPEL1Q2QD12 228 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 OR9G4Q8NGQ1 327 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 THYN1Q9P016 225 aa13.18□□□□□ -0.3
LMCD1-204ENST00000426878 CDS2O95674 445 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 HSPE1P61604 102 aaKnown RBP13.17□□□□□ -0.3
LMCD1-204ENST00000426878 SP6Q3SY56 376 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 IL34Q6ZMJ4 242 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 OR6Q1Q8NGQ2 317 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 EEF1AKMT3Q96AZ1 226 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 TMEM222Q9H0R3 208 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 NAA60Q9H7X0 242 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
LMCD1-204ENST00000426878 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
LMCD1-204ENST00000426878 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 FAUP35544 74 aaKnown RBP13.16□□□□□ -0.3
LMCD1-204ENST00000426878 TRIM16LQ309B1 348 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 GLYATL2Q8WU03 294 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 HINT2Q9BX68 163 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 MCUBQ9NWR8 336 aa13.16□□□□□ -0.3
LMCD1-204ENST00000426878 F11RQ9Y624 299 aaKnown RBP13.16□□□□□ -0.3
LMCD1-204ENST00000426878 TEX13DA0A0J9YY54 714 aaPredicted RBP13.15□□□□□ -0.3
LMCD1-204ENST00000426878 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.3
LMCD1-204ENST00000426878 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
LMCD1-204ENST00000426878 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
LMCD1-204ENST00000426878 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
LMCD1-204ENST00000426878 PRCDQ00LT1 54 aa13.15□□□□□ -0.3
LMCD1-204ENST00000426878 DHODHQ02127 395 aa13.15□□□□□ -0.3
LMCD1-204ENST00000426878 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms