RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TCTAP57738 103 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 GNG3P63215 75 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 LYZL4Q96KX0 146 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 Q96M66 194 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 GP6Q9HCN6 339 aa13.38□□□□□ -0.27
PKP4-205ENST00000426248 TRAV38-1A0A0B4J264 116 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 E9PLN8 166 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 SS18L1O75177 396 aaPredicted RBP13.37□□□□□ -0.27
PKP4-205ENST00000426248 KLRB1Q12918 225 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 ZNF841Q6ZN19 808 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 LRTM2Q8N967 370 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 NDUFS8O00217 210 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 SCTP09683 121 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 RPEL1Q2QD12 228 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 MTCH1Q9NZJ7 389 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 GNG12Q9UBI6 72 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 IGFL3Q6UXB1 125 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 DMDP11532 3685 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 DMXL1Q9Y485 3027 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 GPX1P07203 203 aa13.37□□□□□ -0.27
PKP4-205ENST00000426248 PDLIM3Q53GG5 364 aaPredicted RBP13.37□□□□□ -0.27
PKP4-205ENST00000426248 CDIPTO14735 213 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 ID3Q02535 119 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 ARL16Q0P5N6 197 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 TAAR3PQ9P1P4 343 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 RAC2P15153 192 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 FXYD3Q14802 87 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 IGFBP7Q16270 282 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 ADAMTS20P59510 1910 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 S1PR2O95136 353 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 PPOXP50336 477 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
PKP4-205ENST00000426248 IGFL2Q6UWQ7 119 aa13.36□□□□□ -0.27
PKP4-205ENST00000426248 ZNF331Q9NQX6 463 aaPredicted RBP13.36□□□□□ -0.27
PKP4-205ENST00000426248 RALYQ9UKM9 306 aaKnown RBP13.36□□□□□ -0.27
PKP4-205ENST00000426248 IGHV1-69-2A0A0G2JMI3 117 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 VENTXO95231 258 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 TYMSP04818 313 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 ANOS1P23352 680 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 SMIM21Q3B7S5 101 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 FNDC4Q9H6D8 234 aaPredicted RBP13.35□□□□□ -0.27
PKP4-205ENST00000426248 ARFGEF3Q5TH69 2177 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 DEGS1O15121 323 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 PDCD6O75340 191 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
PKP4-205ENST00000426248 ANKHD1Q8IWZ3 2542 aaKnown RBP13.35□□□□□ -0.27
PKP4-205ENST00000426248 OR5B21A6NL26 309 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 LRRC75BQ2VPJ9 315 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 DOLPP1Q86YN1 238 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 POM121L2Q96KW2 1035 aa13.35□□□□□ -0.27
PKP4-205ENST00000426248 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 DEFB108AA8MXU0 73 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 J3QW42 95 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 HAND1O96004 215 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 CECR9P0C854 216 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 CRYGSP22914 178 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 OR1N2Q8NGR9 330 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 TNFRSF14Q92956 283 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 TNRC6AQ8NDV7 1962 aaKnown RBP13.34□□□□□ -0.27
PKP4-205ENST00000426248 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 TMEM211Q6ICI0 200 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 ZNF114Q8NC26 417 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 PSMG3Q9BT73 122 aaPredicted RBP13.34□□□□□ -0.27
PKP4-205ENST00000426248 MED12LQ86YW9 2145 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 IGKV1D-33P01593 117 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 IGKV1-33P01594 117 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 AGMATQ9BSE5 352 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 GTSF1LQ9H1H1 148 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 KCNIP1Q9NZI2 227 aa13.34□□□□□ -0.27
PKP4-205ENST00000426248 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 ZNF503-AS2A6NEH8 195 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 CEACAM4O75871 244 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.27
PKP4-205ENST00000426248 PMCHL1Q16048 86 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 MMD2Q8IY49 270 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 RAB37Q96AX2 223 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 SFXN3Q9BWM7 321 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.27
PKP4-205ENST00000426248 ENY2Q9NPA8 101 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 POLDIP2Q9Y2S7 368 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 RNF114Q9Y508 228 aa13.33□□□□□ -0.27
PKP4-205ENST00000426248 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
PKP4-205ENST00000426248 PLP1P60201 277 aa13.33□□□□□ -0.28
PKP4-205ENST00000426248 KCNS1Q96KK3 526 aa13.33□□□□□ -0.28
PKP4-205ENST00000426248 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
PKP4-205ENST00000426248 hCG_38984A0A1B0GV85 526 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 PDE6DO43924 150 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
PKP4-205ENST00000426248 KLF14Q8TD94 323 aaPredicted RBP13.32□□□□□ -0.28
PKP4-205ENST00000426248 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 BCL3P20749 454 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms