RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 PRSS8Q16651 343 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 FAM159AQ6UWV7 190 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 C11orf44Q8N8P7 122 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 ZNF319Q9P2F9 582 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 LINC00312Q9Y6C7 94 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 SELENOKQ9Y6D0 94 aa6.65□□□□□ -1.34
CTNND1-207ENST00000426142 DOCK6Q96HP0 2047 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 CGAP01215 116 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 THBDP07204 575 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 DANCRP0C864 163 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 PRB4P10163 310 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-207ENST00000426142 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 EFNA2O43921 213 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 GCGP01275 180 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 ZNF25P17030 456 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-207ENST00000426142 UQCRFS1P47985 274 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 EMP1P54849 157 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 ZP1P60852 638 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.35
CTNND1-207ENST00000426142 C12orf54Q6X4T0 127 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 SDHCQ99643 169 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-207ENST00000426142 MRPL32Q9BYC8 188 aaKnown RBP6.65□□□□□ -1.35
CTNND1-207ENST00000426142 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.35
CTNND1-207ENST00000426142 SBF1O95248 1867 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 TMEM262E9PQX1 116 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 AGAP20933 346 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 TSPOP30536 169 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 CENPWQ5EE01 88 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 RTN4RL2Q86UN3 420 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 C3orf56Q8N813 242 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 GALNT14Q96FL9 552 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 SMDT1Q9H4I9 107 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 SAA1P0DJI8 122 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-207ENST00000426142 GNLYP22749 145 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 ZIC4Q8N9L1 334 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 ELOVL1Q9BW60 279 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 MAP1LC3AQ9H492 121 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 IGKV1-9A0A0C4DH69 117 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 IGFBP3P17936 291 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-207ENST00000426142 SRIP30626 198 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 C21orf62Q9NYP8 219 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 LOC102724200A0A096LPH7 203 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-207ENST00000426142 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 RBFOX2O43251 390 aaKnown RBP eCLIP6.64□□□□□ -1.354e-7■■■■□ 19.5
CTNND1-207ENST00000426142 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 MEF2CQ06413 473 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-207ENST00000426142 TEX45Q8NA69 505 aa6.64□□□□□ -1.35
CTNND1-207ENST00000426142 GRIFINA4D1Z8 144 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 E9PLN8 166 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RAMP3O60896 148 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 SMUG1Q53HV7 270 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 NR2C2APQ86WQ0 139 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 OR4X2Q8NGF9 303 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ZNF418Q8TF45 676 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 SFRP2Q96HF1 295 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 KLHDC3Q9BQ90 382 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 VKORC1Q9BQB6 163 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 SNRNP200O75643 2136 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ZNF318Q5VUA4 2279 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 IGLV3-32A0A0A0MS00 114 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 M0R381 172 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 CIDEAO60543 219 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 SMAGPQ0VAQ4 97 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 GGNQ86UU5 652 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 CLDND2Q8NHS1 167 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ZMAT5Q9UDW3 170 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 NEUROG3Q9Y4Z2 214 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ALPK2Q86TB3 2170 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 MST1P26927 711 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 PAQR4Q8N4S7 273 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 GLMPQ8WWB7 406 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RPRMQ9NS64 109 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 LINC00527Q9UJ94 153 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 CEACAM4O75871 244 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 IGHV1-46P01743 117 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RPS20P60866 119 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 GTF3AQ92664 365 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 SDK2Q58EX2 2172 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 TRAV24A0A0B4J272 114 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 PSMB11A5LHX3 300 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
CTNND1-207ENST00000426142 RNASE4P34096 147 aaKnown RBP6.63□□□□□ -1.35
CTNND1-207ENST00000426142 A6NDN8 102 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 HLA-DQA1P01909 254 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-207ENST00000426142 RAB9AP51151 201 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 LEMD1Q68G75 181 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 MIR17HGQ75NE6 70 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 OR10S1Q8NGN2 331 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 GATAD1Q8WUU5 269 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 SMIM12Q96EX1 92 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 RCC1LQ96I51 464 aaKnown RBP6.62□□□□□ -1.35
CTNND1-207ENST00000426142 C19orf24Q9BVV8 132 aa6.62□□□□□ -1.35
CTNND1-207ENST00000426142 RALGAPA1Q6GYQ0 2036 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms