RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NKX2-2O95096 273 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MT-ND4P03905 459 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 IGHV3-43DP0DP04 118 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 RPA2P15927 270 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 CCL3L1P16619 93 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 NMUP48645 174 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MLLT11Q13015 90 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 KRTAP24-1Q3LI83 254 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SPANXN4Q5MJ08 99 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 IGFL2Q6UWQ7 119 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 BCL2L2Q92843 193 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MUS81Q96NY9 551 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 QTRT1Q9BXR0 403 aaKnown RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SLC25A15Q9Y619 301 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SORL1Q92673 2214 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 C2CD3Q4AC94 2353 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PRSS29PA6NIE9 313 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TMEM212A6NML5 194 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 K7EM74 188 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SOD3P08294 240 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 LAMP1P11279 417 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SYNJ2BPP57105 145 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TAS2R20P59543 309 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 HIST1H1AQ02539 215 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 ZNF266Q14584 549 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 KIR3DS1Q14943 382 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 ZIC1Q15915 447 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TMEM241Q24JQ0 296 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PRICKLE4Q2TBC4 344 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 Q6ZN92 141 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 OR8J2Q8NGG1 315 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TMEM255BQ8WV15 326 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 GTSF1Q8WW33 167 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MIEN1Q9BRT3 115 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TMEM133Q9H2Q1 129 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 NXT2Q9NPJ8 142 aaKnown RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 IGLV3-16A0A075B6K0 115 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 F8WEM9 126 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 ZNF561-AS1K7EIQ3 104 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SIGLEC5O15389 551 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SELENOFO60613 162 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 IGHG4P01861 327 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SLC25A4P12235 298 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 CEBPDP49716 269 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 HIST2H3PS2Q5TEC6 136 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 ZNF66Q6ZN08 573 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PXT1Q8NFP0 134 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 RNASEH2CQ8TDP1 164 aaKnown RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 NEUROG1Q92886 237 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 KCNS1Q96KK3 526 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 IL4I1Q96RQ9 567 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PAXXQ9BUH6 204 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SEC11CQ9BY50 192 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 CSTL1Q9H114 145 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MED20Q9H944 212 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 NPDC1Q9NQX5 325 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SDR39U1Q9NRG7 319 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 CLCF1Q9UBD9 225 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 ING1Q9UK53 422 aaPredicted RBP2.92□□□□□ -1.94
TOP2A-201ENST00000423485 LINC00312Q9Y6C7 94 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 TRAV6A0A075B6T7 132 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 C15orf61A6NNL5 157 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PATE4P0C8F1 98 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 OR13C7P0DN81 318 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 GABRB1P18505 474 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 HBG1P69891 147 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 HBG2P69892 147 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PAX5Q02548 391 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 BAXQ07812 192 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 PCLAFQ15004 111 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 KIAA1644Q3SXP7 199 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 MSRB3Q8IXL7 192 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 C20orf196Q8IYI0 205 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 OR51E1Q8TCB6 317 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 SLC25A46Q96AG3 418 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 HSH2DQ96JZ2 352 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 KCTD7Q96MP8 289 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 FEVQ99581 238 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 LIME1Q9H400 295 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 GPR84Q9NQS5 396 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 GSKIPQ9P0R6 139 aa2.92□□□□□ -1.94
TOP2A-201ENST00000423485 DEFB131BA0A096LNP1 70 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 A0A0B4J2A0 478 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 RPL36A-HNRNPH2H7BZ11 118 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 SULT1A3P0DMM9 295 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 SULT1A4P0DMN0 295 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 ZNF121P58317 390 aaPredicted RBP2.91□□□□□ -1.94
TOP2A-201ENST00000423485 RPL18Q07020 188 aaKnown RBP2.91□□□□□ -1.94
TOP2A-201ENST00000423485 CCSMST1Q4G0I0 132 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 ZNF474Q6S9Z5 364 aaPredicted RBP2.91□□□□□ -1.94
TOP2A-201ENST00000423485 COX15Q7KZN9 410 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 SAMD12Q8N8I0 201 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 WIPF2Q8TF74 440 aaPredicted RBP2.91□□□□□ -1.94
TOP2A-201ENST00000423485 GLMPQ8WWB7 406 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 CHCHD5Q9BSY4 110 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 DCSTAMPQ9H295 470 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 SHPKQ9UHJ6 478 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 STARD10Q9Y365 291 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 IGLV5-52A0A0A0MRZ9 124 aa2.91□□□□□ -1.94
TOP2A-201ENST00000423485 GHRHP01286 108 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms