RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PAQR4Q8N4S7 273 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 Q6ZN92 141 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 OR5AU1Q8NGC0 362 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 GPR146Q96CH1 333 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 MRPL32Q9BYC8 188 aaKnown RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 FOXA2Q9Y261 457 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 OOSP1A8MZH6 123 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 LILRA1O75019 489 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 MRPL30Q8TCC3 161 aaKnown RBP8.97□□□□□ -0.97
PTCH1-206ENST00000421141 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
PTCH1-206ENST00000421141 NPFFO15130 113 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 LYPD3O95274 346 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 FAM103A1Q9BTL3 118 aaKnown RBP8.96□□□□□ -0.97
PTCH1-206ENST00000421141 RPUSD1Q9UJJ7 312 aaKnown RBP8.96□□□□□ -0.97
PTCH1-206ENST00000421141 ZNF345Q14585 488 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 LDLRAD3Q86YD5 345 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 OR10G8Q8NGN5 311 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 PRR14LQ5THK1 2151 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 ISLRO14498 428 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 HSBP1O75506 76 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 LDLRAD2Q5SZI1 272 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 STHQ8IWL8 128 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 CLDND2Q8NHS1 167 aa8.96□□□□□ -0.97
PTCH1-206ENST00000421141 KLF2Q9Y5W3 355 aaPredicted RBP8.96□□□□□ -0.97
PTCH1-206ENST00000421141 FCN1O00602 326 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 ADIPOQQ15848 244 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 GTF3AQ92664 365 aaKnown RBP8.96□□□□□ -0.98
PTCH1-206ENST00000421141 SLC25A38Q96DW6 304 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 GPR82Q96P67 336 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 TNFSF18Q9UNG2 199 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 DPRXA6NFQ7 191 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 PLAUP00749 431 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 IGFBP3P17936 291 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-206ENST00000421141 AGAP20933 346 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 DLK1P80370 383 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 GALNT14Q96FL9 552 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 ARL2-SNX15V9GYD0 113 aa8.96□□□□□ -0.98
PTCH1-206ENST00000421141 CXCL3P19876 107 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 C19orf35Q6ZS72 473 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF79Q15937 498 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 FAM159AQ6UWV7 190 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 RSG1Q9BU20 258 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-206ENST00000421141 PAGE4O60829 102 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-48P01763 117 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 FOXG1P55316 489 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-206ENST00000421141 SUMO1P63165 101 aaKnown RBP8.95□□□□□ -0.98
PTCH1-206ENST00000421141 SEC11CQ9BY50 192 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-35A0A0C4DH35 117 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 TIMM23O14925 209 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 CA2P00918 260 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 IGKV3-20P01619 116 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 OR10S1Q8NGN2 331 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 NPIPB3Q92617 1050 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 OR51M1Q9H341 326 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 TMPRSS5Q9H3S3 457 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 C11orf44Q8N8P7 122 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 PPP1R3EQ9H7J1 279 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 FAM53AQ6NSI3 398 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-206ENST00000421141 LINC00305Q7Z4B0 112 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 C11orf42Q8N5U0 333 aa8.95□□□□□ -0.98
PTCH1-206ENST00000421141 PRB1P04280 392 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 CD24P25063 80 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 ATP6V0CP27449 155 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 HIST1H1AQ02539 215 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 PLAURQ03405 335 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 TUSC1Q2TAM9 212 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 RRHO14718 337 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 AMY1AP04745 511 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 TAF15Q92804 592 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 HSPB7Q9UBY9 170 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 COL5A1P20908 1838 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 CEACAM8P31997 349 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 P2RY4P51582 365 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 RELBQ01201 579 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 ELF5Q9UKW6 265 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 TRAV24A0A0B4J272 114 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 NPIPB6E9PJ23 425 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 TCAPO15273 167 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 SEC11BP0C7V7 166 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 GGACTQ9BVM4 153 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 WNT10AQ9GZT5 417 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 C1QL1O75973 258 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 C8orf88P0DMB2 117 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 RPS20P60866 119 aaKnown RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 CYP2G1PQ6ZSU1 146 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 SNURFLB1AK76 121 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 H3BUX3 64 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 J3QLI3 93 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 IGHV3-11P01762 117 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 RPS11P62280 158 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTCH1-206ENST00000421141 TMEM187Q14656 261 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 MIC13Q5XKP0 118 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 HEPN1Q6WQI6 88 aa8.94□□□□□ -0.98
PTCH1-206ENST00000421141 MEOX2P50222 304 aa8.93□□□□□ -0.98
PTCH1-206ENST00000421141 HIST3H3Q16695 136 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms