RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GPR183P32249 361 aa13□□□□□ -0.33
MSH6-203ENST00000420813 TM4SF20Q53R12 229 aa13□□□□□ -0.33
MSH6-203ENST00000420813 PLET1Q6UQ28 207 aa13□□□□□ -0.33
MSH6-203ENST00000420813 DHRS11Q6UWP2 260 aa13□□□□□ -0.33
MSH6-203ENST00000420813 BTNL8Q6UX41 500 aa13□□□□□ -0.33
MSH6-203ENST00000420813 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
MSH6-203ENST00000420813 CADM3Q8N126 398 aa13□□□□□ -0.33
MSH6-203ENST00000420813 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
MSH6-203ENST00000420813 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
MSH6-203ENST00000420813 S100A16Q96FQ6 103 aaKnown RBP13□□□□□ -0.33
MSH6-203ENST00000420813 EHFQ9NZC4 300 aa13□□□□□ -0.33
MSH6-203ENST00000420813 ANAPC10Q9UM13 185 aa13□□□□□ -0.33
MSH6-203ENST00000420813 UFC1Q9Y3C8 167 aa13□□□□□ -0.33
MSH6-203ENST00000420813 MEIS3P1A6NDR6 274 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 A6NHS1 94 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 SCAF4O95104 1147 aaKnown RBP12.99□□□□□ -0.33
MSH6-203ENST00000420813 F2RP25116 425 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 ERVK-16P61578 105 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 GGTLC1Q9BX51 225 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
MSH6-203ENST00000420813 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
MSH6-203ENST00000420813 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
MSH6-203ENST00000420813 SMIM31A0A1B0GVY4 71 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 MARCH11A6NNE9 402 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 TGOLN2O43493 480 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 SERPINE2P07093 398 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 TRAPPC2P0DI81 140 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 TRAPPC2BP0DI82 140 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 ZNF585BQ52M93 769 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 UBE2NLQ5JXB2 153 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 RBPMS2Q6ZRY4 209 aaKnown RBP12.98□□□□□ -0.33
MSH6-203ENST00000420813 OR10W1Q8NGF6 305 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 OR1L8Q8NGR8 309 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
MSH6-203ENST00000420813 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 TEX50A0A1B0GTY4 177 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 PGLYRP1O75594 196 aaPredicted RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 RLN1P04808 185 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 OR13C7P0DN81 318 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 NAT1P18440 290 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 ALDH3B2P48448 385 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 TAS2R46P59540 309 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 TMEM69Q5SWH9 247 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 OR1L6Q8NGR2 347 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 LSM10Q969L4 123 aaKnown RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 ZNF2Q9BSG1 426 aaPredicted RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 C5orf66Q9H5L9 145 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 NDUFA4L2Q9NRX3 87 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 NDUFA13Q9P0J0 144 aa12.97□□□□□ -0.33
MSH6-203ENST00000420813 PLECQ15149 4684 aaKnown RBP12.97□□□□□ -0.33
MSH6-203ENST00000420813 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 RPA2P15927 270 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 RFX2P48378 723 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 TAS2R20P59543 309 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 SLC25A24Q6NUK1 477 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 SPSB3Q6PJ21 355 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 CMTM1Q8IZ96 169 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 OR5H2Q8NGV7 314 aa12.96□□□□□ -0.33
MSH6-203ENST00000420813 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
MSH6-203ENST00000420813 DAZ1Q9NQZ3 744 aaKnown RBP12.96□□□□□ -0.33
MSH6-203ENST00000420813 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
MSH6-203ENST00000420813 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.34
MSH6-203ENST00000420813 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
MSH6-203ENST00000420813 SLC38A6Q8IZM9 456 aa12.95□□□□□ -0.34
MSH6-203ENST00000420813 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
MSH6-203ENST00000420813 SAMD12Q8N8I0 201 aa12.95□□□□□ -0.34
MSH6-203ENST00000420813 FCAMRQ8WWV6 532 aa12.95□□□□□ -0.34
MSH6-203ENST00000420813 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
MSH6-203ENST00000420813 OR2T8A6NH00 312 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 GPR31O00270 319 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 NDUFA4O00483 81 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 TSPAN4O14817 238 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 SNAPC5O75971 98 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 KRASP01116 189 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 PMP2P02689 132 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 TGFBR1P36897 503 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 LPAR6P43657 344 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 OR5B3Q8NH48 314 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 FXYD6Q9H0Q3 95 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 FAM212BQ9NTI7 297 aaPredicted RBP12.94□□□□□ -0.34
MSH6-203ENST00000420813 FKBP11Q9NYL4 201 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 C21orf62Q9NYP8 219 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 PRNDQ9UKY0 176 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 BIRC6Q9NR09 4857 aa12.94□□□□□ -0.34
MSH6-203ENST00000420813 PRSS3P35030 304 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 G6PCP35575 357 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 MFAP2P55001 183 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 LAMTOR1Q6IAA8 161 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 SCARB1Q8WTV0 552 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
MSH6-203ENST00000420813 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms