RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 ATP5G2Q06055 141 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 TRIM16LQ309B1 348 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 HSD17B13Q7Z5P4 300 aaPredicted RBP14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 GDPD1Q8N9F7 314 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 OR4A16Q8NH70 328 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 C5orf66Q9H5L9 145 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 AKIP1Q9NQ31 210 aa14.05□□□□□ -0.16
ECHDC3-202ENST00000420401 IGHV4OR15-8A0A075B7B6 117 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 A0A087WW49 117 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 CGB1A6NKQ9 187 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 IGKV1-39P01597 117 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 IGKV1D-39P04432 117 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 DEFA4P12838 97 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 HIST1H1BP16401 226 aaKnown RBP14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 ZNF45Q02386 682 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 SP6Q3SY56 376 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 SRRQ9GZT4 340 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 NAA60Q9H7X0 242 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 NSG2Q9Y328 171 aa14.04□□□□□ -0.16
ECHDC3-202ENST00000420401 CTRB1P17538 263 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 UCP1P25874 307 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 INPP1P49441 399 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 DHODHQ02127 395 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 ZNF343Q6P1L6 599 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 OR5B3Q8NH48 314 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 HINT2Q9BX68 163 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 NDUFA4L2Q9NRX3 87 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 PEF1Q9UBV8 284 aaKnown RBP14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 ZMAT5Q9UDW3 170 aaKnown RBP14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 TENM3Q9P273 2699 aa14.03□□□□□ -0.16
ECHDC3-202ENST00000420401 IGLC7A0M8Q6 106 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 ANKRD34BA5PLL1 514 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 SEC14L6B5MCN3 397 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 CYB5BO43169 146 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 OR2J3O76001 311 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 REG1AP05451 166 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 ZP3P21754 424 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 AKR1C2P52895 323 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 SLURP1P55000 103 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 DEFA5Q01523 94 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 FAM209BQ5JX69 171 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 TRIQKQ629K1 86 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 ZNF57Q68EA5 555 aaPredicted RBP14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 SGPP2Q8IWX5 399 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 DCUN1D4Q92564 292 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 LSM10Q969L4 123 aaKnown RBP14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM56Q96MV1 263 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM222Q9H0R3 208 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM14BQ9NUH8 114 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 FBXL7Q9UJT9 491 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 KCNIP3Q9Y2W7 256 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 DNAH3Q8TD57 4116 aa14.02□□□□□ -0.17
ECHDC3-202ENST00000420401 CRYM-AS1A6NIL9 109 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 OVOL1O14753 267 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 OR5AC1P0C628 307 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 EXOSC2Q13868 293 aaKnown RBP14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 KLK9Q2XQG4 91 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 C15orf32Q32M92 178 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 DEFB121Q5J5C9 76 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 C11orf87Q6NUJ2 197 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 OR10W1Q8NGF6 305 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 DLX4Q92988 240 aaPredicted RBP14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 RRNAD1Q96FB5 475 aaKnown RBP14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 KLK9Q9UKQ9 250 aa14.01□□□□□ -0.17
ECHDC3-202ENST00000420401 CDS2O95674 445 aa14□□□□□ -0.17
ECHDC3-202ENST00000420401 IGKV1-5P01602 117 aa14□□□□□ -0.17
ECHDC3-202ENST00000420401 HOXD3P31249 432 aaPredicted RBP14□□□□□ -0.17
ECHDC3-202ENST00000420401 MECP2P51608 486 aaKnown RBP14□□□□□ -0.17
ECHDC3-202ENST00000420401 C19orf35Q6ZS72 473 aa14□□□□□ -0.17
ECHDC3-202ENST00000420401 RNASE11Q8TAA1 199 aaKnown RBP14□□□□□ -0.17
ECHDC3-202ENST00000420401 FANCD2OSQ96PS1 177 aa14□□□□□ -0.17
ECHDC3-202ENST00000420401 THYN1Q9P016 225 aa14□□□□□ -0.17
ECHDC3-202ENST00000420401 IGLV11-55A0A075B6I3 123 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 A6NHS1 94 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 DBX1A6NMT0 343 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 AKR1C4P17516 323 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 INSL3P51460 131 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 HSPE1P61604 102 aaKnown RBP13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 EGFEM1PQ0D2K5 195 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 BAK1Q16611 211 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 GLYATL2Q8WU03 294 aa13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 SLC25A21Q9BQT8 299 aaPredicted RBP13.99□□□□□ -0.17
ECHDC3-202ENST00000420401 NAP1L6A6NFF2 107 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 NDUFB8O95169 186 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 ANXA3P12429 323 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 TATDN3Q17R31 274 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 ZNF429Q86V71 674 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 FAM219AQ8IW50 185 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 RBPMSQ93062 196 aaKnown RBP13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 EEF1AKMT3Q96AZ1 226 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 GALNT14Q96FL9 552 aa13.98□□□□□ -0.17
ECHDC3-202ENST00000420401 CXorf58Q96LI9 332 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms