RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 FAAP20Q6NZ36 180 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 ACSM6Q6P461 480 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 OR1L8Q8NGR8 309 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 OR5B3Q8NH48 314 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 TMEM14BQ9NUH8 114 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 FKBP11Q9NYL4 201 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 COPZ2Q9P299 210 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 V9GYH0 126 aa16.41■□□□□ 0.22
CPNE1-211ENST00000420363 C15orf61A6NNL5 157 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 PI3P19957 117 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 CD69Q07108 199 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 MARCH1Q8TCQ1 289 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 FANCD2OSQ96PS1 177 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 NDUFA4L2Q9NRX3 87 aa16.4■□□□□ 0.22
CPNE1-211ENST00000420363 IGLV11-55A0A075B6I3 123 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.39■□□□□ 0.21
CPNE1-211ENST00000420363 ANKRD34BA5PLL1 514 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 OR2J3O76001 311 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 TRAPPC2P0DI81 140 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 TRAPPC2BP0DI82 140 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 DCTN2Q13561 401 aaKnown RBP16.39■□□□□ 0.21
CPNE1-211ENST00000420363 LSM10Q969L4 123 aaKnown RBP16.39■□□□□ 0.21
CPNE1-211ENST00000420363 TRIM63Q969Q1 353 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
CPNE1-211ENST00000420363 OR51B2Q9Y5P1 312 aa16.39■□□□□ 0.21
CPNE1-211ENST00000420363 C3orf85A0A1B0GTC6 90 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 TEX50A0A1B0GTY4 177 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 SAP30O75446 220 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 ATG12O94817 140 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 TRBV12-3P01733 135 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 DEFA4P12838 97 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 KLF5Q13887 457 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-211ENST00000420363 C19orf35Q6ZS72 473 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 H2BFWTQ7Z2G1 175 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 CCDC190Q86UF4 302 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 GDPD1Q8N9F7 314 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 DEDD2Q8WXF8 326 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 TP53RKQ96S44 253 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 ELOVL1Q9BW60 279 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 NDUFA13Q9P0J0 144 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 SCP2D1Q9UJQ7 156 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 FBXL7Q9UJT9 491 aa16.38■□□□□ 0.21
CPNE1-211ENST00000420363 COL7A1Q02388 2944 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 CYB5BO43169 146 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 REG1AP05451 166 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 UCP1P25874 307 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 ETV6P41212 452 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 ZNF79Q15937 498 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 RPEL1Q2QD12 228 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 OR51S1Q8NGJ8 323 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 THAP7Q9BT49 309 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-211ENST00000420363 C5orf66Q9H5L9 145 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 NSG2Q9Y328 171 aa16.37■□□□□ 0.21
CPNE1-211ENST00000420363 BMPR1BO00238 502 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 P0C879 139 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 FAUP35544 74 aaKnown RBP16.36■□□□□ 0.21
CPNE1-211ENST00000420363 AP3S2P59780 193 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 WT1-ASQ06250 92 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 Q8N402 240 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 OR10W1Q8NGF6 305 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 OR6Q1Q8NGQ2 317 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 TMEM56Q96MV1 263 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 RTBDNQ9BSG5 229 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-211ENST00000420363 THYN1Q9P016 225 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 GPR132Q9UNW8 380 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
CPNE1-211ENST00000420363 KMT2CQ8NEZ4 4911 aaKnown RBP16.35■□□□□ 0.21
CPNE1-211ENST00000420363 KLF9Q13886 244 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-211ENST00000420363 TATDN3Q17R31 274 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 PYDC2Q56P42 97 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 SPANXN2Q5MJ10 180 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 OR9G4Q8NGQ1 327 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 OR4A16Q8NH70 328 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 EEF1AKMT3Q96AZ1 226 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 CXorf58Q96LI9 332 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 CCDC140Q96MF4 163 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 SCGB3A2Q96PL1 93 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 OR4C12Q96R67 309 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 B9D2Q9BPU9 175 aa16.35■□□□□ 0.21
CPNE1-211ENST00000420363 ZNF256Q9Y2P7 627 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-211ENST00000420363 DBX1A6NMT0 343 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 NDUFB8O95169 186 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 OR13C7P0DN81 318 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 AKR1C2P52895 323 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 OR1L6Q8NGR2 347 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 TMEM222Q9H0R3 208 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 NAA60Q9H7X0 242 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 SIGLEC8Q9NYZ4 499 aa16.34■□□□□ 0.21
CPNE1-211ENST00000420363 F11RQ9Y624 299 aaKnown RBP16.34■□□□□ 0.21
CPNE1-211ENST00000420363 TRBV7-1A0A0A6YYK4 115 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 CRYM-AS1A6NIL9 109 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 IGKV1-5P01602 117 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 SYNJ2BPP57105 145 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 PRCDQ00LT1 54 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 TRIM16LQ309B1 348 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 HINT2Q9BX68 163 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 MCUBQ9NWR8 336 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 DMRT1Q9Y5R6 373 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 SORL1Q92673 2214 aa16.33■□□□□ 0.2
CPNE1-211ENST00000420363 GGCTO75223 188 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms