RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 LOXP28300 417 aaPredicted RBP11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 SMUG1Q53HV7 270 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 WNT2P09544 360 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 IGFBP2P18065 325 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 KCNIP2Q9NS61 270 aa11.31□□□□□ -0.6
CCT6P3-201ENST00000419314 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 LY86O95711 162 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 GNLYP22749 145 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 PCGF1Q9BSM1 259 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 JKAMPQ9P055 326 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 S100A9P06702 114 aaKnown RBP11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 CGB3P0DN86 165 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 CGB7P0DN87 165 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 S100PP25815 95 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 CORO2AQ92828 525 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
CCT6P3-201ENST00000419314 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 SFTPCP11686 197 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 PPOXP50336 477 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 CLEC7AQ9BXN2 247 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 WDR83OSQ9Y284 106 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 H7BYZ3 331 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 MMDQ15546 238 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 STPG3Q8N7X2 389 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 NAV3Q8IVL0 2385 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 RHOBP62745 196 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
CCT6P3-201ENST00000419314 H0YJW9 148 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 CHRNA7P36544 502 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 TOLLIPQ9H0E2 274 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 NDUFS7O75251 213 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 PSG5Q15238 335 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 SSX2Q16385 188 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 MRPL41Q8IXM3 137 aaKnown RBP11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 OR51G1Q8NGK1 321 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
CCT6P3-201ENST00000419314 IL6RP08887 468 aaPredicted RBP11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 OR10J4P0C629 311 aa11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 ORM2P19652 201 aa11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 USF1P22415 310 aaPredicted RBP11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 HIST1H2BAQ96A08 127 aa11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 CBLN4Q9NTU7 201 aa11.27□□□□□ -0.6
CCT6P3-201ENST00000419314 NDUFB4O95168 129 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 LIPFP07098 398 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 MC5RP33032 325 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 MIOXQ9UGB7 285 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 CREBBPQ92793 2442 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 A0A1W2PPQ1 181 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 SOD3P08294 240 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 RAB5AP20339 215 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 VDAC2P45880 294 aaPredicted RBP11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 NPIPB3Q92617 1050 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 NABP2Q9BQ15 211 aa11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
CCT6P3-201ENST00000419314 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 MPDU1O75352 247 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 P0C879 139 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 RPL27AP46776 148 aaKnown RBP11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 NDUFA6P56556 154 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 CR1LQ2VPA4 569 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
CCT6P3-201ENST00000419314 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms