RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SPTBN2O15020 2390 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
HDAC9-208ENST00000417496 CBLN1P23435 193 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 HSPE1P61604 102 aaKnown RBP11.88□□□□□ -0.51
HDAC9-208ENST00000417496 FOXL1Q12952 345 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 OR5I1Q13606 314 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 SSX2Q16385 188 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 TEX38Q6PEX7 206 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 FAM216AQ8WUB2 273 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 ZCCHC14Q8WYQ9 949 aaKnown RBP11.88□□□□□ -0.51
HDAC9-208ENST00000417496 RND1Q92730 232 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 MISP3Q96FF7 219 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 TMEM14BQ9NUH8 114 aa11.88□□□□□ -0.51
HDAC9-208ENST00000417496 CD99P14209 185 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 ADMP35318 185 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 CFHR2P36980 270 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 DMRTC2Q8IXT2 367 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-208ENST00000417496 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
HDAC9-208ENST00000417496 OR10G8Q8NGN5 311 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 OR51B2Q9Y5P1 312 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
HDAC9-208ENST00000417496 PKDREJQ9NTG1 2253 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 NDUFB7P17568 137 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 FAM27E3Q08E93 113 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 FAM215AQ9Y5M1 114 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 TRGV8A0A0C4DH27 118 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 J3QR06 171 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 SPINK4O60575 86 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 SCGB1D1O95968 90 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 GCGP01275 180 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 PAX1P15863 534 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 GLRXP35754 106 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 ZNF90Q03938 601 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
HDAC9-208ENST00000417496 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 OR10J4P0C629 311 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 LINC00869P0C866 280 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 RAB7AP51149 207 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 RHOBP62745 196 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 PSG5Q15238 335 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 PARD6AQ9NPB6 346 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
HDAC9-208ENST00000417496 TNFAIP6P98066 277 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-208ENST00000417496 BSNQ9UPA5 3926 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 MKRN2OSH3BPM6 223 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 CRYBB3P26998 211 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 CCL8P80075 99 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PRR20EP86478 221 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PRR20CP86479 221 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PRR20DP86480 221 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PRR20BP86481 221 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PRR20AP86496 221 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 TIMM23BQ5SRD1 257 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 K7EM74 188 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
HDAC9-208ENST00000417496 SLC35B1P78383 322 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 PIP4P1Q86T03 277 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
HDAC9-208ENST00000417496 F2Z2F3 143 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 REG1BP48304 166 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 RAB31Q13636 194 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 STUMQ69YW2 141 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF439Q8NDP4 499 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 OR9G1Q8NH87 305 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-208ENST00000417496 TACC2O95359 2948 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-208ENST00000417496 IGHV3-48P01763 117 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 ERVFC1-1P60608 527 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 ZNF503Q96F45 646 aa11.83□□□□□ -0.52
HDAC9-208ENST00000417496 EAF1Q96JC9 268 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-208ENST00000417496 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
HDAC9-208ENST00000417496 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms