RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TRAV25A0A0B4J276 109 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 MDFIC2A0A1B0GVS7 189 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 H3BML4 177 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 HTR1DP28221 377 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 MAGEA5P43359 124 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 REG1BP48304 166 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 DSCR4P56555 118 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-205ENST00000415298 PLCXD3Q63HM9 321 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 ADAMTSL5Q6ZMM2 481 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 C8orf86Q6ZUL3 223 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 ST8SIA1Q92185 356 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 ABHD14BQ96IU4 210 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 ZNF71Q9NQZ8 489 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-205ENST00000415298 FAM181BA6NEQ2 426 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 CFHR2P36980 270 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 TMEM50BP56557 158 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 SERF2P84101 59 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 WIPI1Q5MNZ9 446 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-205ENST00000415298 EBLN2Q6P2I7 272 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 SCGB1C1Q8TD33 95 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 SLC39A9Q9NUM3 307 aa17.03■□□□□ 0.32
AP1S3-205ENST00000415298 KLF13Q9Y2Y9 288 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-205ENST00000415298 SLC22A20A6NK97 555 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 UCNP55089 124 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 TLE1Q04724 770 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 TMEM97Q5BJF2 176 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 TRAT1Q6PIZ9 186 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 SPANXB1Q9NS25 103 aaPredicted RBP17.02■□□□□ 0.32
AP1S3-205ENST00000415298 RALYQ9UKM9 306 aaKnown RBP17.02■□□□□ 0.32
AP1S3-205ENST00000415298 CYSLTR1Q9Y271 337 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 ARL2-SNX15V9GYD0 113 aa17.02■□□□□ 0.32
AP1S3-205ENST00000415298 ISLRO14498 428 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 SPINK8P0C7L1 97 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 ALKBH6Q3KRA9 238 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 ZADH2Q8N4Q0 377 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 TMEM251Q8N6I4 163 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.31
AP1S3-205ENST00000415298 OTOSQ8NHW6 89 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 SCRT2Q9NQ03 307 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 DOCK11Q5JSL3 2073 aa17.02■□□□□ 0.31
AP1S3-205ENST00000415298 CACNA1CQ13936 2221 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 VWC2LB2RUY7 222 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 MT-ND6P03923 174 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 HIST1H1EP10412 219 aaKnown RBP17.01■□□□□ 0.31
AP1S3-205ENST00000415298 PLGLB1Q02325 96 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 ABCA11PQ4W5N1 156 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 IGFL3Q6UXB1 125 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 ARHGAP5-AS1Q96IT6 56 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 SPAG8Q99932 426 aaPredicted RBP17.01■□□□□ 0.31
AP1S3-205ENST00000415298 NECAP2Q9NVZ3 263 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 VPREB3Q9UKI3 123 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 OR4C46A6NHA9 309 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 SLC25A53Q5H9E4 307 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 TMEM178AQ8NBL3 297 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 ZNF439Q8NDP4 499 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 ITPR1Q14643 2758 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 ALPK2Q86TB3 2170 aa17.01■□□□□ 0.31
AP1S3-205ENST00000415298 HELTA6NFD8 242 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 ACSM6Q6P461 480 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 IL36BQ9NZH7 164 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 B9D1Q9UPM9 204 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 TRAV17A0A0B4J275 112 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 SVILO95425 2214 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 FABP2P12104 132 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 TTC9CQ8N5M4 171 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 OR8B12Q8NGG6 310 aa17■□□□□ 0.31
AP1S3-205ENST00000415298 B3GALT5-AS1P59052 145 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 GPX7Q96SL4 187 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-205ENST00000415298 DEFB127Q9H1M4 99 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 NGBQ9NPG2 151 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 PKD1L2Q7Z442 2459 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 ATRXP46100 2492 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 A0A1W2PNR3 127 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 DEGS1O15121 323 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 ZNHIT1O43257 154 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 MPIG6BO95866 241 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 GNG3P63215 75 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 ATP5G2Q06055 141 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 SPATA46Q5T0L3 261 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 SSC4DQ8WTU2 575 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 GLMPQ8WWB7 406 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 NAA38Q9BRA0 125 aaKnown RBP16.99■□□□□ 0.31
AP1S3-205ENST00000415298 C1QTNF4Q9BXJ3 329 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 ZNF257Q9Y2Q1 563 aa16.99■□□□□ 0.31
AP1S3-205ENST00000415298 TLN1Q9Y490 2541 aaKnown RBP16.98■□□□□ 0.31
AP1S3-205ENST00000415298 C2orf70A6NJV1 201 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 ZNF878C9JN71 531 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 CA1P00915 261 aaPredicted RBP16.98■□□□□ 0.31
AP1S3-205ENST00000415298 LGALS4P56470 323 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 UEVLDQ8IX04 471 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 ZNF611Q8N823 705 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 OR10G8Q8NGN5 311 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 SPIN2AQ99865 258 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 SPIN2BQ9BPZ2 258 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 TMEM204Q9BSN7 226 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 LOC107986453A0A1B0GWG9 222 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 WIPF1O43516 503 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 Q6ZS92 163 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 OR10D3Q8NH80 312 aa16.98■□□□□ 0.31
AP1S3-205ENST00000415298 NAT8BQ9UHF3 227 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms