RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 LPAR5Q9H1C0 372 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 FAM206AQ9NX38 181 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 KLRF1Q9NZS2 232 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 GSKIPQ9P0R6 139 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 DEC1Q9P2X7 70 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 TP53TG3Q9ULZ0 132 aa2.86□□□□□ -1.95
HMGB3P23-201ENST00000414981 SCN2AQ99250 2005 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TGIF2-C20orf24A0A0A6YYL0 155 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 A0A0J9YY10 115 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 FOXI3A8MTJ6 420 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR11H12B2RN74 326 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 H0YGG7 62 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM250H0YL14 139 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 M0R143 59 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 CDIPTO14735 213 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 PHOX2AO14813 284 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GEMIN2O14893 280 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SOX15O60248 233 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC16A7O60669 478 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 NXPH4O95158 308 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 VENTXO95231 258 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 IFNA1P01562 189 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGKV1D-16P01601 117 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 PMP2P02689 132 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 PRH1P02810 166 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SRP19P09132 144 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GZMBP10144 247 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 CD99P14209 185 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 AZU1P20160 251 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GRPRP30550 384 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 S100A7P31151 101 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 IL2RGP31785 369 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 RAB7AP51149 207 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 POLR2HP52434 150 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR1D5P58170 312 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 RND3P61587 244 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GRB2P62993 217 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SERF2P84101 59 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF616Q08AN1 781 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 EBPQ15125 230 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 PDGFRLQ15198 375 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 RAB35Q15286 201 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GUSBP1Q15486 140 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 MPV17LQ2QL34 196 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 NCMAPQ5T1S8 102 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 C1orf194Q5T5A4 169 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR2T2Q6IF00 324 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 DUX4L9Q6RFH8 374 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SPNS3Q6ZMD2 512 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 Q6ZS49 121 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF429Q86V71 674 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OOSP2Q86WS3 158 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIR3DL3Q8N743 410 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF615Q8N8J6 731 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC26A10Q8NG04 563 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR11H1Q8NG94 326 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR4S1Q8NGB4 309 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10G3Q8NGC4 313 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10AD1Q8NGE0 317 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR11H2Q8NH07 326 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5B3Q8NH48 314 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZPLD1Q8TCW7 415 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 Q8WTZ3 238 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 MBD3L1Q8WWY6 194 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM234Q8WY98 164 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 C11orf40Q8WZ69 217 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 DLX4Q92988 240 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TOMM40LQ969M1 308 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 CMBLQ96DG6 245 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 SFRP2Q96HF1 295 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 ADTRPQ96IZ2 230 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 CAPNS2Q96L46 248 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 C1orf147Q96MC9 270 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR2M4Q96R27 311 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H2BLQ99880 126 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 CHCHD5Q9BSY4 110 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM208Q9BTX3 173 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 APOOQ9BUR5 198 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 TTTY10Q9BZA0 68 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 NAA60Q9H7X0 242 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 PLEKHF2Q9H8W4 249 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 MRPS18CQ9Y3D5 142 aaKnown RBP2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 GOLT1BQ9Y3E0 138 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 WSB1Q9Y6I7 421 aa2.85□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGLV4-3A0A075B6K6 122 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 TRAV9-1A0A075B6T8 112 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 CENPVL3A0A0U1RRI6 287 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 LOC102725191A0A1B0GVB3 256 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF726A6NNF4 738 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 RNF212BA8MTL3 300 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 A8MU10 97 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 SRRM5B3KS81 715 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF878C9JN71 531 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 K7EP13 123 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 AGPAT2O15120 278 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 CYB5BO43169 146 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 PHF1O43189 567 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 MMP23AO75900 390 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 YIF1AO95070 293 aa2.84□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGLV3-1P01715 115 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms