RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 HOXA1P49639 335 aaPredicted RBP7.68□□□□□ -1.18
RIF1-202ENST00000414861 LAMTOR1Q6IAA8 161 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 ZNF546Q86UE3 836 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 OR1L8Q8NGR8 309 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 PPP1R14BQ96C90 147 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 DUX5Q96PT3 197 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 C1RLQ9NZP8 487 aa7.68□□□□□ -1.18
RIF1-202ENST00000414861 IGHV7-81A0A0B4J1V7 117 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 INAFM1C9JVW0 142 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 ACTL6BO94805 426 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 CXCL2P19875 107 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 RPL27AP46776 148 aaKnown RBP7.67□□□□□ -1.18
RIF1-202ENST00000414861 CX3CL1P78423 397 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 C9orf62Q8N4C0 152 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 SSMEM1Q8WWF3 244 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 SRSF12Q8WXF0 261 aaKnown RBP7.67□□□□□ -1.18
RIF1-202ENST00000414861 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 FAM103A1Q9BTL3 118 aaKnown RBP7.67□□□□□ -1.18
RIF1-202ENST00000414861 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 FKBP11Q9NYL4 201 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 BOLA1Q9Y3E2 137 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 FBXO7Q9Y3I1 522 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 IGLC7A0M8Q6 106 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 IGSF23A1L1A6 192 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 FAM24AA6NFZ4 105 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 TEX22C9J3V5 150 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 E5RGE8 158 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 MED6O75586 246 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 HLA-DRB1P01911 266 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 RLN2P04090 185 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 CAV2P51636 162 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 AP2S1P53680 142 aaPredicted RBP7.67□□□□□ -1.18
RIF1-202ENST00000414861 WT1-ASQ06250 92 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 TMEM65Q6PI78 240 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 C19orf35Q6ZS72 473 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 OR4C12Q96R67 309 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 RASL11BQ9BPW5 248 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 PLEKHA3Q9HB20 300 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
RIF1-202ENST00000414861 VPREB3Q9UKI3 123 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 WSB1Q9Y6I7 421 aa7.67□□□□□ -1.18
RIF1-202ENST00000414861 LINC01548A6NM66 108 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 HMSDA8MTL9 139 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 L7N2F9 121 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 FGF16O43320 207 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 REG1AP05451 166 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 HKR1P10072 659 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 AREGP15514 252 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 MAS1LP35410 378 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 VAMP2P63027 116 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 TMEM267Q0VDI3 215 aaPredicted RBP7.66□□□□□ -1.18
RIF1-202ENST00000414861 FXYD3Q14802 87 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
RIF1-202ENST00000414861 OR2C3Q8N628 320 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 OR5R1Q8NH85 324 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 TMEM170AQ8WVE7 144 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 BSCL2Q96G97 398 aaPredicted RBP7.66□□□□□ -1.18
RIF1-202ENST00000414861 PSENENQ9NZ42 101 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 PITPNC1Q9UKF7 332 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 CNIH1O95406 144 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 SRD5A1P18405 259 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 PVALBP20472 110 aaPredicted RBP7.66□□□□□ -1.18
RIF1-202ENST00000414861 P2RY1P47900 373 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 SPANXN5Q5MJ07 72 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 Q6ZS46 218 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 MFFQ9GZY8 342 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 ESM1Q9NQ30 184 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
RIF1-202ENST00000414861 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
RIF1-202ENST00000414861 BTBD17A6NE02 478 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 C15orf62A8K5M9 175 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 RPL12P30050 165 aaKnown RBP7.65□□□□□ -1.18
RIF1-202ENST00000414861 BLCAPP62952 87 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 ASPHD1Q5U4P2 390 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 HAPLN4Q86UW8 402 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 TMEM252Q8N6L7 170 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 ARPC1AQ92747 370 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 AQP10Q96PS8 301 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 HSPB11Q9Y547 144 aa7.65□□□□□ -1.18
RIF1-202ENST00000414861 DNAJC9-AS1A6NH13 148 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 TSC22D2O75157 780 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 CST7O76096 145 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 METTL15P1P0C7V9 234 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 EGR2P11161 476 aaPredicted RBP7.64□□□□□ -1.19
RIF1-202ENST00000414861 RPL23AP62750 156 aaKnown RBP7.64□□□□□ -1.19
RIF1-202ENST00000414861 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
RIF1-202ENST00000414861 NHLH2Q02577 135 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 ABHD5Q8WTS1 349 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
RIF1-202ENST00000414861 ENY2Q9NPA8 101 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 CACFD1Q9UGQ2 172 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 ATP6V0E1O15342 81 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 GPR137BO60478 399 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 TAS2R30P59541 319 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 ARL16Q0P5N6 197 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 TMEM14EPQ6UXP3 125 aa7.64□□□□□ -1.19
RIF1-202ENST00000414861 ACOT7LQ6ZUV0 252 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms