RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CENPSQ8N2Z9 138 aa11.38□□□□□ -0.59
LIMS1-206ENST00000414829 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
LIMS1-206ENST00000414829 MS4A10Q96PG2 267 aa11.38□□□□□ -0.59
LIMS1-206ENST00000414829 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 IGKV1-39P01597 117 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 IGKV1D-39P04432 117 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 APELAP0DMC3 54 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 CTRB1P17538 263 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 ZP3P21754 424 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 RAB25P57735 213 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 RHOGP84095 191 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 KIAA0141Q14154 515 aaPredicted RBP11.37□□□□□ -0.59
LIMS1-206ENST00000414829 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 SP6Q3SY56 376 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 CTRB2Q6GPI1 263 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 ETV3LQ6ZN32 361 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 LGI3Q8N145 548 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
LIMS1-206ENST00000414829 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 ZMAT5Q9UDW3 170 aaKnown RBP11.37□□□□□ -0.59
LIMS1-206ENST00000414829 TMEM56-RWDD3S4R434 201 aa11.37□□□□□ -0.59
LIMS1-206ENST00000414829 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 DUXBA0A1W2PPF3 345 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 IGLC7A0M8Q6 106 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 HMX3A6NHT5 357 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 LINC01619G3V211 115 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 NDUFB6O95139 128 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
LIMS1-206ENST00000414829 MECP2P51608 486 aaKnown RBP11.36□□□□□ -0.59
LIMS1-206ENST00000414829 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 TMEM268Q5VZI3 342 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 OR1N2Q8NGR9 330 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 HINT2Q9BX68 163 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
LIMS1-206ENST00000414829 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
LIMS1-206ENST00000414829 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 TEX50A0A1B0GTY4 177 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 AREGP15514 252 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 VAMP1P23763 118 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 HSPE1P61604 102 aaKnown RBP11.35□□□□□ -0.59
LIMS1-206ENST00000414829 PRCDQ00LT1 54 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 KLK9Q2XQG4 91 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 C18orf65Q6ZTR6 163 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 SLC35G3Q8N808 338 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 KLK9Q9UKQ9 250 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 NSG2Q9Y328 171 aa11.35□□□□□ -0.59
LIMS1-206ENST00000414829 LYRM1O43325 122 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 IFNA17P01571 189 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 P0C879 139 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 OR13C7P0DN81 318 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
LIMS1-206ENST00000414829 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
LIMS1-206ENST00000414829 TMEM187Q14656 261 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
LIMS1-206ENST00000414829 WNK1Q9H4A3 2382 aa11.34□□□□□ -0.59
LIMS1-206ENST00000414829 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 A0A1B0GW64 132 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 E7EUB6 86 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 IGHV3-11P01762 117 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 CCR6P51684 374 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 AARDQ4LEZ3 155 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
LIMS1-206ENST00000414829 ZNF114Q8NC26 417 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 EEF1AKMT3Q96AZ1 226 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
LIMS1-206ENST00000414829 FBXL7Q9UJT9 491 aa11.33□□□□□ -0.6
LIMS1-206ENST00000414829 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
LIMS1-206ENST00000414829 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 UPK1BO75841 260 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 OR2J3O76001 311 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 SFT2D2O95562 160 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 MYOD1P15172 320 aa11.32□□□□□ -0.6
LIMS1-206ENST00000414829 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms