RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PNKDQ8N490 385 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 FOXC2Q99958 501 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 MPPED1O15442 326 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 GPR12P47775 334 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 RPL30P62888 115 aaKnown RBP12.61□□□□□ -0.39
SHMT2-202ENST00000414700 DLK1P80370 383 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 EIF4EBP1Q13541 118 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-202ENST00000414700 SGPP2Q8IWX5 399 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
SHMT2-202ENST00000414700 TP53RKQ96S44 253 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 TBX15Q96SF7 602 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 A0A1W2PRD5 423 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 A0A1W2PRF3 423 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 A0A1W2PRM7 423 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 LINC00473A8K010 186 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 B4DSR2 109 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 TOX4O94842 621 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 IGLV1-47P01700 117 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 SRP19P09132 144 aaKnown RBP12.6□□□□□ -0.39
SHMT2-202ENST00000414700 JOSD1Q15040 202 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-202ENST00000414700 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-202ENST00000414700 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 CLEC7AQ9BXN2 247 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 HIF1ANQ9NWT6 349 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 URGCP-MRPS24S4R325 110 aa12.6□□□□□ -0.39
SHMT2-202ENST00000414700 OR5AC1P0C628 307 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RAB7AP51149 207 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 PAX8Q06710 450 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 ZNF429Q86V71 674 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 OR10X1Q8NGY0 326 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 ZNF596Q8TC21 504 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 FRZBQ92765 325 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
SHMT2-202ENST00000414700 NAA60Q9H7X0 242 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 A0A1B0GV50 99 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RAB29O14966 203 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 MBPP02686 304 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-202ENST00000414700 HOXB4P17483 251 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RAB4AP20338 218 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 REG1BP48304 166 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RND3P61587 244 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 OR4P4Q8NGL7 312 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
SHMT2-202ENST00000414700 ABHD5Q8WTS1 349 aa12.59□□□□□ -0.39
SHMT2-202ENST00000414700 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
SHMT2-202ENST00000414700 M0R1X1 148 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
SHMT2-202ENST00000414700 IGHV4-31P0DP07 118 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-202ENST00000414700 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 HLA-DRB5Q30154 266 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 LINC00311Q8N616 119 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 HSD17B11Q8NBQ5 300 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 TMEM186Q96B77 213 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 KIAA1456Q9P272 454 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.4
SHMT2-202ENST00000414700 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 PHOX2AO14813 284 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 F2RP25116 425 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 LINC01356Q8N9X3 169 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 LHX4Q969G2 390 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 B4DEV8 164 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 TGFAP01135 160 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 AVPP01185 164 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
SHMT2-202ENST00000414700 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
SHMT2-202ENST00000414700 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 HAGHQ16775 308 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 NCR3LG1Q68D85 454 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
SHMT2-202ENST00000414700 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-202ENST00000414700 BUB1B-PAK6H3BSN5 160 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 SMAD7O15105 426 aaKnown RBP12.56□□□□□ -0.4
SHMT2-202ENST00000414700 RAMP3O60896 148 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 CCL20P78556 96 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 HNF4GQ14541 408 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 TMEM187Q14656 261 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 LHFPL4Q7Z7J7 247 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 TMEM183AQ8IXX5 376 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms