RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 KLK9Q9UKQ9 250 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
LINC00398-201ENST00000414407 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 NUDT19A8MXV4 375 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 SFT2D2O95562 160 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 DHFRP00374 187 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 TRGV3P03979 118 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 APELAP0DMC3 54 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 CTRB1P17538 263 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 PSMB6P28072 239 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 TPPP2P59282 170 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 CTRB2Q6GPI1 263 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
LINC00398-201ENST00000414407 USMG5Q96IX5 58 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 MS4A10Q96PG2 267 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
LINC00398-201ENST00000414407 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
LINC00398-201ENST00000414407 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 A0A0B4J293 547 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 DUXBA0A1W2PPF3 345 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 DBX1A6NMT0 343 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 I3L521 148 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 TCRBP04435 133 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 AREGP15514 252 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 VAMP1P23763 118 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 MYCNOSP40205 109 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 HSPE1P61604 102 aaKnown RBP12.8□□□□□ -0.36
LINC00398-201ENST00000414407 PPP1R1AQ13522 171 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 MRPL41Q8IXM3 137 aaKnown RBP12.8□□□□□ -0.36
LINC00398-201ENST00000414407 CACFD1Q9UGQ2 172 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 FLVCR2Q9UPI3 526 aa12.8□□□□□ -0.36
LINC00398-201ENST00000414407 A0A0G2JRQ6 117 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 FAM223BA6NKX1 122 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 RBMXL2O75526 392 aaKnown RBP12.79□□□□□ -0.36
LINC00398-201ENST00000414407 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
LINC00398-201ENST00000414407 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 IFITM3Q01628 133 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 FAM223AQ8IWN6 122 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 CASTOR1Q8WTX7 329 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 C20orf85Q9H1P6 137 aa12.79□□□□□ -0.36
LINC00398-201ENST00000414407 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
LINC00398-201ENST00000414407 TRRAPQ9Y4A5 3859 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 FAM240BA0A1B0GVZ2 78 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 INS-IGF2F8WCM5 200 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
LINC00398-201ENST00000414407 OR4E1P0C645 316 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 RAB25P57735 213 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 WT1-ASQ06250 92 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 NMSQ5H8A3 153 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 Q6ZRM9 215 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 OR10W1Q8NGF6 305 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 P2RX4Q99571 388 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 GNB4Q9HAV0 340 aa12.78□□□□□ -0.36
LINC00398-201ENST00000414407 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 CCL24O00175 119 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 CYB5BO43169 146 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 ST8SIA3O43173 380 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 HLA-AP01891 365 aaKnown RBP12.77□□□□□ -0.37
LINC00398-201ENST00000414407 PF4P02776 101 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 OR13C7P0DN81 318 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
LINC00398-201ENST00000414407 ANKRD55Q3KP44 614 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
LINC00398-201ENST00000414407 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 LYZL2Q7Z4W2 148 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 LYG2Q86SG7 212 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 OR1L6Q8NGR2 347 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 RAX2Q96IS3 184 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 HINT2Q9BX68 163 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
LINC00398-201ENST00000414407 VWFP04275 2813 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
LINC00398-201ENST00000414407 IFNA17P01571 189 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 PRH1P02810 166 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 SULT1A3P0DMM9 295 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 SULT1A4P0DMN0 295 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 SLC25A6P12236 298 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 DEFA4P12838 97 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
LINC00398-201ENST00000414407 DEFA1P59665 94 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 DEFA3P59666 94 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 SPCS3P61009 180 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 RHOGP84095 191 aa12.76□□□□□ -0.37
LINC00398-201ENST00000414407 DHRS2Q13268 280 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms