RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 DIAPH2-AS1Q14236 149 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 NSUN5P1Q3KNT7 163 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 CXorf66Q5JRM2 361 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 KCNRGQ8N5I3 272 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 RNF5Q99942 180 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 TMEM140Q9NV12 185 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 BET1LQ9NYM9 111 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 HSPB7Q9UBY9 170 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 RNF222A6NCQ9 220 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 SYNGR2O43760 224 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 FGF2P09038 288 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 VAMP2P63027 116 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 TMUB2Q71RG4 321 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 ZNF429Q86V71 674 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 C1QL4Q86Z23 238 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 OR52E5Q8NH55 327 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 SLC25A33Q9BSK2 321 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
SCAMP4-204ENST00000414057 WNK1Q9H4A3 2382 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 A0A1W2PPI3 338 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 RBMXL2O75526 392 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 IL6RP08887 468 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 CD1BP29016 333 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 TAS2R30P59541 319 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 POLR2GP62487 172 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 TNFRSF9Q07011 255 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 IZUMO4Q1ZYL8 232 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 OR4A47Q6IF82 309 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 MOB3BQ86TA1 216 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 RBM14Q96PK6 669 aaKnown RBP13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 CITED2Q99967 270 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 ARL6Q9H0F7 186 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 SLA2Q9H6Q3 261 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 WSB1Q9Y6I7 421 aa13.41□□□□□ -0.26
SCAMP4-204ENST00000414057 KANTRA0A1W2PQU2 76 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 SSSCA1O60232 199 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 RPL12P30050 165 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 OPCMLQ14982 345 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 Q6ZS46 218 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 SSX9Q7RTT3 188 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 CENPVQ7Z7K6 275 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 PUSL1Q8N0Z8 303 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 WIPF2Q8TF74 440 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 LYRM2Q9NU23 88 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 FKBP11Q9NYL4 201 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 FOXA2Q9Y261 457 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 BOLA1Q9Y3E2 137 aa13.4□□□□□ -0.26
SCAMP4-204ENST00000414057 C15orf61A6NNL5 157 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 CD24P25063 80 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 SPCS3P61009 180 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 UBE2KP61086 200 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 RPS16P62249 146 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 RPL23AP62750 156 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 VMA21Q3ZAQ7 101 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 HIST2H2BDQ6DRA6 164 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 OR2C3Q8N628 320 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 TSNAXQ99598 290 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 SLC25A31Q9H0C2 315 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
SCAMP4-204ENST00000414057 G3V4G9 280 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 TAAR5O14804 337 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 BCL2L11O43521 198 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 SPDEFO95238 335 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 SAA1P0DJI8 122 aaPredicted RBP13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 AP2S1P53680 142 aaPredicted RBP13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 REC114Q7Z4M0 266 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 VKORC1L1Q8N0U8 176 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 SMIM8Q96KF7 97 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 MAGT1Q9H0U3 335 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM14BQ9NUH8 114 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 VWFP04275 2813 aa13.38□□□□□ -0.27
SCAMP4-204ENST00000414057 SRRM4A7MD48 611 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 UPK2O00526 184 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 TSC22D2O75157 780 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 KBTBD11O94819 623 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 BAXQ07812 192 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 BEAN1Q3B7T3 259 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM95Q3KNT9 176 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 KPRPQ5T749 579 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 TEX45Q8NA69 505 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 OR4X2Q8NGF9 303 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 CLCC1Q96S66 551 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 ARPC5LQ9BPX5 153 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 RBKSQ9H477 322 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 ZC4H2Q9NQZ6 224 aa13.37□□□□□ -0.27
SCAMP4-204ENST00000414057 CAV2P51636 162 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
SCAMP4-204ENST00000414057 TMEM167AQ8TBQ9 72 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms