RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SPTA1P02549 2419 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 A0A0J9YW62 118 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 FAM24AA6NFZ4 105 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 MPDU1O75352 247 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 PFN1P07737 140 aaKnown RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 OR4A8P0C604 315 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 BCL2P10415 239 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF17P17021 662 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 POU3F1Q03052 451 aaPredicted RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 NIT1Q86X76 327 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 SPACA5Q96QH8 159 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 PRR25Q96S07 402 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 C11orf1Q9H5F2 150 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 BOKQ9UMX3 212 aaPredicted RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 TINCRA0A1B0GVN0 87 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 DHRS7CA6NNS2 312 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 IFNA1P01562 189 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 NPSP0C0P6 89 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 GATA1P15976 413 aaPredicted RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 TCL1AP56279 114 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 TAS2R30P59541 319 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 SP6Q3SY56 376 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF880Q6PDB4 577 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 GGNQ86UU5 652 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 TMEM252Q8N6L7 170 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 ST6GALNAC3Q8NDV1 305 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 IL17DQ8TAD2 202 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF503Q96F45 646 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 BTF3L4Q96K17 158 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 AGMATQ9BSE5 352 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF71Q9NQZ8 489 aaPredicted RBP7.79□□□□□ -1.16
SNHG3-201ENST00000413987 NAT8Q9UHE5 227 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 LAMP3Q9UQV4 416 aa7.79□□□□□ -1.16
SNHG3-201ENST00000413987 A0A1W2PP11 408 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 IGSF23A1L1A6 192 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 CCL24O00175 119 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 SOX15O60248 233 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 CCL1P22362 96 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 LEPP41159 167 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GNG3P63215 75 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 HIST1H3AP68431 136 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 CEACAM21Q3KPI0 293 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF705AQ6ZN79 300 aaPredicted RBP7.78□□□□□ -1.16
SNHG3-201ENST00000413987 Q6ZT83 130 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 IMMP2LQ96T52 175 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GNG13Q9P2W3 67 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 KLF13Q9Y2Y9 288 aaPredicted RBP7.78□□□□□ -1.16
SNHG3-201ENST00000413987 COL12A1Q99715 3063 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF850A8MQ14 1090 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 MSTNO14793 375 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 PDE6DO43924 150 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 KIR2DS4P43632 304 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 FMODQ06828 376 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 TMEM241Q24JQ0 296 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 CD300EQ496F6 205 aaPredicted RBP7.78□□□□□ -1.16
SNHG3-201ENST00000413987 GBGT1Q8N5D6 347 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 OR5C1Q8NGR4 320 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 TOMM40LQ969M1 308 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 C20orf173Q96LM9 149 aa7.78□□□□□ -1.16
SNHG3-201ENST00000413987 RALYQ9UKM9 306 aaKnown RBP7.78□□□□□ -1.16
SNHG3-201ENST00000413987 CENPVL3A0A0U1RRI6 287 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 SH2D1BO14796 132 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 CXCL13O43927 109 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 CRYAAP02489 173 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 MMP7P09237 267 aaPredicted RBP7.77□□□□□ -1.17
SNHG3-201ENST00000413987 CEACAM8P31997 349 aaPredicted RBP7.77□□□□□ -1.17
SNHG3-201ENST00000413987 PLA2G5P39877 138 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 GALR1P47211 349 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 RPL29P47914 159 aaKnown RBP7.77□□□□□ -1.17
SNHG3-201ENST00000413987 CDSNQ15517 529 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 KISS1Q15726 138 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 IGFL2Q6UWQ7 119 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 MRGPRGQ86SM5 289 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 MMD2Q8IY49 270 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 MBD3L1Q8WWY6 194 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 C20orf144Q9BQM9 153 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 MIEN1Q9BRT3 115 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 QTRT1Q9BXR0 403 aaKnown RBP7.77□□□□□ -1.17
SNHG3-201ENST00000413987 KIAA1549Q9HCM3 1950 aa7.77□□□□□ -1.17
SNHG3-201ENST00000413987 IGKV1D-8A0A087WSZ0 117 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 IGKV1D-43A0A0B4J1Z2 117 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 H7BYZ3 331 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 K7ENP7 123 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 PHF1O43189 567 aaPredicted RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 HPRT1P00492 218 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 DYNLT3P51808 116 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 PAX9P55771 341 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 KLF5Q13887 457 aaPredicted RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF672Q499Z4 452 aaPredicted RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 CYP2G1PQ6ZSU1 146 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 C16orf82Q7Z2V1 217 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 OR51G1Q8NGK1 321 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 OR10D3Q8NH80 312 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms