RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 WDR87Q6ZQQ6 2873 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 INTS1Q8N201 2190 aaKnown RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 IGKV1-27A0A075B6S5 117 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 IGHV3-72A0A0B4J1Y9 119 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SPAARA0A1B0GVQ0 90 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 LINC00854A0A1B0GVQ3 168 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 A0A1B0GW55 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 GGT3PA6NGU5 568 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 C21orf140B9A014 251 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF878C9JN71 531 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 GABARAPH6UMI1 98 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 MFNGO00587 321 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TP53I11O14683 189 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 RER1O15258 196 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 ORC5O43913 435 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 PFDN1O60925 122 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 IGHV3-11P01762 117 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 UBCP0CG48 685 aaKnown RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4L2P0CJ85 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4L3P0CJ86 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4L5P0CJ88 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4L6P0CJ89 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4L7P0CJ90 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SULT1A3P0DMM9 295 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SULT1A4P0DMN0 295 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC2A1P11166 492 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SRMP19623 302 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CXCL3P19876 107 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 HLA-DMAP28067 261 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 HSD11B1P28845 292 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CRABP1P29762 137 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 RCVRNP35243 200 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 RFC3P40938 356 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 EIF1P41567 113 aaKnown RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 BLVRAP53004 296 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR2B6P58173 313 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DEFA1P59665 94 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DEFA3P59666 94 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 RRAS2P62070 204 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC35A1P78382 337 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 GLO1Q04760 184 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 EIF3IQ13347 325 aaKnown RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 KCNJ8Q15842 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 LINC00303Q3SY05 128 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM176BQ3YBM2 270 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 PYDC2Q56P42 97 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TPTE2P1Q5T6R2 138 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 FAM222AQ5U5X8 452 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 HACD4Q5VWC8 232 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM42Q69YG0 159 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR10K2Q6IF99 312 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DNM1P34Q6PK57 102 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DEGS2Q6QHC5 323 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC36A1Q7Z2H8 476 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 AKAP14Q86UN6 197 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 NAA40Q86UY6 237 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 RAB43Q86YS6 212 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 C20orf196Q8IYI0 205 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 C9orf62Q8N4C0 152 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 MIR7-3HGQ8N6C7 128 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM251Q8N6I4 163 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM104Q8NE00 496 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DEFB124Q8NES8 71 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR4K17Q8NGC6 315 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR51D1Q8NGF3 324 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR4C16Q8NGL9 310 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR9G4Q8NGQ1 327 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR13C8Q8NGS7 320 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR10D3Q8NH80 312 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR2V1Q8NHB1 315 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 GPX8Q8TED1 209 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 THEM6Q8WUY1 208 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 AQP3Q92482 292 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 NRGNQ92686 78 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DDIT4LQ96D03 193 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CMBLQ96DG6 245 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CEP19Q96LK0 163 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 BEX2Q9BXY8 128 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TTTY12Q9BZ98 90 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC7A5P2Q9GIP4 190 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 NDEL1Q9GZM8 345 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 PBOV1Q9GZY1 135 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC22A4Q9H015 551 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 LPAR5Q9H1C0 372 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 METTL17Q9H7H0 456 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 HRASLSQ9HDD0 168 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 SDHAF3Q9NRP4 125 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CA10Q9NS85 328 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM38BQ9NVV0 291 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 MCUBQ9NWR8 336 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 GLTPQ9NZD2 209 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DUX4Q9UBX2 424 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DKKL1Q9UK85 242 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 HHLA2Q9UM44 414 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 FLVCR2Q9UPI3 526 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 CBY1Q9Y3M2 126 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 BDP1A6H8Y1 2624 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 MYO15AQ9UKN7 3530 aa1.91□□□□□ -2.1
HMGB1P11-201ENST00000413899 DSCAMO60469 2012 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms