RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 CADM3Q8N126 398 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 UXS1Q8NBZ7 420 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 MLXQ9UH92 298 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 A0A087WXM4 84 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 PGLYRP1O75594 196 aaPredicted RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 RBMY1DP0C7P1 496 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 NAT1P18440 290 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 S100GP29377 79 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 PRSS3P35030 304 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 RPS19P39019 145 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 RFX2P48378 723 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 OR6F1Q8NGZ6 308 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 LSM10Q969L4 123 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 ATP6V0BQ99437 205 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 RETNQ9HD89 108 aa11.08□□□□□ -0.64
CBX3-203ENST00000409747 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
CBX3-203ENST00000409747 SNAPC5O75971 98 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 PMP2P02689 132 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 SERPINE2P07093 398 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 TGFBR1P36897 503 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 RBPMS2Q6ZRY4 209 aaKnown RBP11.07□□□□□ -0.64
CBX3-203ENST00000409747 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
CBX3-203ENST00000409747 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
CBX3-203ENST00000409747 TEX50A0A1B0GTY4 177 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 GPR31O00270 319 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 TGOLN2O43493 480 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 SCAF4O95104 1147 aaKnown RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 TNFAIP8O95379 198 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 C8orf88P0DMB2 117 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 TM4SF20Q53R12 229 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 LPCAT3Q6P1A2 487 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 UNQ9165/PRO28630Q6UXU0 137 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 OR1L6Q8NGR2 347 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 SLC25A46Q96AG3 418 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 FAM110AQ9BQ89 295 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 PRNDQ9UKY0 176 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 SMIM31A0A1B0GVY4 71 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 KRASP01116 189 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 RPA2P15927 270 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 LPAR6P43657 344 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 LSM3P62310 102 aaKnown RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 WT1-ASQ06250 92 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 ZNF585BQ52M93 769 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 SPSB3Q6PJ21 355 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 FCAMRQ8WWV6 532 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 TSC22D3Q99576 134 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 HINT2Q9BX68 163 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 FAM212BQ9NTI7 297 aaPredicted RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 OR51B2Q9Y5P1 312 aa11.06□□□□□ -0.64
CBX3-203ENST00000409747 F11RQ9Y624 299 aaKnown RBP11.06□□□□□ -0.64
CBX3-203ENST00000409747 HRH1P35367 487 aa11.05□□□□□ -0.64
CBX3-203ENST00000409747 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
CBX3-203ENST00000409747 TMEM190Q8WZ59 177 aa11.05□□□□□ -0.64
CBX3-203ENST00000409747 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
CBX3-203ENST00000409747 SCPEP1Q9HB40 452 aa11.05□□□□□ -0.64
CBX3-203ENST00000409747 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
CBX3-203ENST00000409747 LOC102724200A0A096LPH7 203 aaPredicted RBP11.04□□□□□ -0.64
CBX3-203ENST00000409747 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 JTBO76095 146 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 APOA1P02647 267 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 G6PCP35575 357 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 TSPAN5P62079 268 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 SLC38A6Q8IZM9 456 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 SPAG8Q99932 426 aaPredicted RBP11.04□□□□□ -0.64
CBX3-203ENST00000409747 C5orf66Q9H5L9 145 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 HLA-DMAP28067 261 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 LAMTOR1Q6IAA8 161 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 OR2C3Q8N628 320 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 GPX8Q8TED1 209 aa11.04□□□□□ -0.64
CBX3-203ENST00000409747 GAR1Q9NY12 217 aaKnown RBP11.04□□□□□ -0.64
CBX3-203ENST00000409747 NDUFA4O00483 81 aa11.03□□□□□ -0.64
CBX3-203ENST00000409747 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
CBX3-203ENST00000409747 RCVRNP35243 200 aa11.03□□□□□ -0.64
CBX3-203ENST00000409747 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
CBX3-203ENST00000409747 TMEM14BQ9NUH8 114 aa11.03□□□□□ -0.64
CBX3-203ENST00000409747 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
CBX3-203ENST00000409747 NSG2Q9Y328 171 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms