RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 REG1AP05451 166 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 IL3P08700 152 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 RPL18Q07020 188 aaKnown RBP0.31□□□□□ -2.36
PMS1-203ENST00000409593 DMTNQ08495 405 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 DHRS9Q9BPW9 319 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 DCUN1D5Q9BTE7 237 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 MED12Q93074 2177 aa0.31□□□□□ -2.36
PMS1-203ENST00000409593 FUOMA2VDF0 154 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 COCHO43405 550 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 RPS4Y1P22090 263 aaKnown RBP0.3□□□□□ -2.36
PMS1-203ENST00000409593 BRS3P32247 399 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 CDC34P49427 236 aaPredicted RBP0.3□□□□□ -2.36
PMS1-203ENST00000409593 TNFAIP6P98066 277 aaPredicted RBP0.3□□□□□ -2.36
PMS1-203ENST00000409593 FABP9Q0Z7S8 132 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 SLC51BQ86UW2 128 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 C11orf40Q8WZ69 217 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 DKKL1Q9UK85 242 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 KLK9Q9UKQ9 250 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 APCP25054 2843 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 C1orf232A0A0U1RR37 186 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 OR4C45A6NMZ5 311 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 GOLGA8MH3BSY2 632 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 OR5F1O95221 314 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 C1QAP02745 245 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 SRP19P09132 144 aaKnown RBP0.3□□□□□ -2.36
PMS1-203ENST00000409593 CCL1P22362 96 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 PPP1R1AQ13522 171 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 LCN15Q6UWW0 184 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 Q8N6K4 173 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 TMEM106AQ96A25 262 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 SMIM19Q96E16 107 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 NDEL1Q9GZM8 345 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 POLR1DQ9Y2S0 133 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 CCDC88AQ3V6T2 1871 aa0.3□□□□□ -2.36
PMS1-203ENST00000409593 EML6Q6ZMW3 1958 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 C19orf84I3L1E1 186 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 BIRC5O15392 142 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 HLA-DRAP01903 254 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 PSMB6P28072 239 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 TNFAIP8L2Q6P589 184 aaPredicted RBP0.29□□□□□ -2.36
PMS1-203ENST00000409593 SPATA8Q6RVD6 105 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 FUNDC1Q8IVP5 155 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 Q8N814 137 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 RAD50Q92878 1312 aa0.29□□□□□ -2.36
PMS1-203ENST00000409593 IGKV1D-42A0A075B6H8 117 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 HSBP1L1C9JCN9 74 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 OR2T1O43869 369 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 FADS1O60427 444 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 FGF6P10767 208 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 KCNE1P15382 129 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 IL36BQ9NZH7 164 aa0.28□□□□□ -2.36
PMS1-203ENST00000409593 TNRC6AQ8NDV7 1962 aaKnown RBP0.28□□□□□ -2.36
PMS1-203ENST00000409593 FABP12A6NFH5 140 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 FABP5P3A8MUU1 101 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 DISC1C4P0D8 188 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 KRT75O95678 551 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 KRT7P08729 469 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 ZNF80P51504 273 aaPredicted RBP0.27□□□□□ -2.37
PMS1-203ENST00000409593 ZNF550Q7Z398 422 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 OOSP2Q86WS3 158 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 C1orf158Q8N1D5 194 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 DNAJB3Q8WWF6 145 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 ROPN1LQ96C74 230 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 KCTD7Q96MP8 289 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 SLC50A1Q9BRV3 221 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 STRCQ7RTU9 1775 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 ERICH2A1L162 156 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 F5H768 121 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 CLPSP04118 112 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 CD151P48509 253 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 MGAT3Q09327 533 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 CLEC6AQ6EIG7 209 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 TMEM161BQ8NDZ6 487 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 IMP3Q9NV31 184 aaKnown RBP0.27□□□□□ -2.37
PMS1-203ENST00000409593 C15orf41Q9Y2V0 281 aa0.27□□□□□ -2.37
PMS1-203ENST00000409593 FAM25EA8MYX2 175 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 HYPMO75409 117 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 UBE2G2P60604 165 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 KISS1Q15726 138 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 SYPL2Q5VXT5 272 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 CST9Q5W186 159 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 HDHD2Q9H0R4 259 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 CHMP4BQ9H444 224 aaKnown RBP0.26□□□□□ -2.37
PMS1-203ENST00000409593 FAM96AQ9H5X1 160 aa0.26□□□□□ -2.37
PMS1-203ENST00000409593 PRM2P04554 102 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 FKBP2P26885 142 aaKnown RBP0.25□□□□□ -2.37
PMS1-203ENST00000409593 RSU1Q15404 277 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 KCNJ8Q15842 424 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 IBA57Q5T440 356 aaKnown RBP0.25□□□□□ -2.37
PMS1-203ENST00000409593 GDF5OSQ5U4N7 250 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 COMMD7Q86VX2 200 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 Q8N402 240 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 LINC00311Q8N616 119 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 AMELYQ99218 206 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 UPF3BQ9BZI7 483 aaKnown RBP0.25□□□□□ -2.37
PMS1-203ENST00000409593 OR51I2Q9H344 312 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 EFCAB1Q9HAE3 211 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 ACER3Q9NUN7 267 aa0.25□□□□□ -2.37
PMS1-203ENST00000409593 CNTRLQ7Z7A1 2325 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms