RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 RAB5CP51148 216 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 HERPUD1Q15011 391 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 PXDC1Q5TGL8 231 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 RPL7L1Q6DKI1 246 aaKnown RBP6.88□□□□□ -1.31
SH3D19-202ENST00000409252 Q6ZSR3 168 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 WFDC11Q8NEX6 87 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 C8orf46Q8TAG6 207 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 RNF5Q99942 180 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 KIAA2026Q5HYC2 2103 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 C15orf61A6NNL5 157 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 HYPMO75409 117 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 GPR183P32249 361 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 ARL3P36405 182 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 AKR1C3P42330 323 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 GALR1P47211 349 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 HAGHQ16775 308 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 C5orf64Q2M2E5 130 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 TMEM252Q8N6L7 170 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 ZNF383Q8NA42 475 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 MED9Q9NWA0 146 aa6.88□□□□□ -1.31
SH3D19-202ENST00000409252 MED13LQ71F56 2210 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 ZNF735P0CB33 412 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 RPL30P62888 115 aaKnown RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 LAMTOR1Q6IAA8 161 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 C3orf56Q8N813 242 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 LINC00052Q96N35 136 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 SOSTQ9BQB4 213 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 ELOVL1Q9BW60 279 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 OR5AC2Q9NZP5 309 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 APOC3P02656 99 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 LINC00869P0C866 280 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 HKR1P10072 659 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TFF3Q07654 80 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TUSC1Q2TAM9 212 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 CLEC19AQ6UXS0 136 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 BET1LQ9NYM9 111 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TECRQ9NZ01 308 aaKnown RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 FOXA2Q9Y261 457 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 OR9G9P0C7N8 305 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 ID1P41134 155 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 RAB4BP61018 213 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TIGITQ495A1 244 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 C12orf54Q6X4T0 127 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TMEM208Q9BTX3 173 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 EPG5Q9HCE0 2579 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 MALRD1Q5VYJ5 2156 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 PITX3O75364 302 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 MMP23AO75900 390 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 SELENOTP62341 195 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 NHLH2Q02577 135 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 PRSS8Q16651 343 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 NPIPB3Q92617 1050 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 TMEM56-RWDD3S4R434 201 aa6.87□□□□□ -1.31
SH3D19-202ENST00000409252 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
SH3D19-202ENST00000409252 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 ITGB1BP1O14713 200 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-202ENST00000409252 RHOGP84095 191 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 C10orf55Q5SWW7 151 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 LYRM2Q9NU23 88 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-202ENST00000409252 IGKV1-6A0A0C4DH72 117 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 LINC00473A8K010 186 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-202ENST00000409252 VENTXO95231 258 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 LOXL1Q08397 574 aaPredicted RBP6.86□□□□□ -1.31
SH3D19-202ENST00000409252 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 C1orf122Q6ZSJ8 110 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 SMIM8Q96KF7 97 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 PRUNE2Q8WUY3 3088 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 ZFYVE26Q68DK2 2539 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 HMSDA8MTL9 139 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
SH3D19-202ENST00000409252 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 C11orf71Q6IPW1 123 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 STXBP6Q8NFX7 210 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 OR4P4Q8NGL7 312 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
SH3D19-202ENST00000409252 C15orf65H3BRN8 121 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 IGHV4-38-2P0DP08 117 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 LINC00205P59089 165 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-202ENST00000409252 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.315e-7■■■■□ 23.4
SH3D19-202ENST00000409252 CDH23Q9H251 3354 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
SH3D19-202ENST00000409252 ZNF462Q96JM2 2506 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 ARHGAP21Q5T5U3 1957 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 MDFIC2A0A1B0GVS7 189 aa6.85□□□□□ -1.31
SH3D19-202ENST00000409252 ZFP36P26651 326 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms