RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SAP30O75446 220 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 TRBV12-3P01733 135 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 C15orf32Q32M92 178 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 OR10W1Q8NGF6 305 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 OR51S1Q8NGJ8 323 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 TP53RKQ96S44 253 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 PRRT1Q99946 306 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 FKBP11Q9NYL4 201 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 WI2-2373I1.2A0A1W2PRP0 233 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 IGLC7A0M8Q6 106 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 HIST1H1BP16401 226 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 SURF2Q15527 256 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 THOC7Q6I9Y2 204 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 FANCD2OSQ96PS1 177 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 NDUFA4L2Q9NRX3 87 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 V9GYH0 126 aa13.78□□□□□ -0.2
PDLIM2-206ENST00000409141 K7EIL1 84 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 NDUFB8O95169 186 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 OR13C7P0DN81 318 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 KLF5Q13887 457 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 RPEL1Q2QD12 228 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 SP6Q3SY56 376 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 ACSM6Q6P461 480 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 CCDC190Q86UF4 302 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 Q8N402 240 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 OR4A16Q8NH70 328 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 RTBDNQ9BSG5 229 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 NDUFA13Q9P0J0 144 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 SCP2D1Q9UJQ7 156 aa13.77□□□□□ -0.21
PDLIM2-206ENST00000409141 DNAH3Q8TD57 4116 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 TEX13DA0A0J9YY54 714 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 ATG12O94817 140 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 TATDN3Q17R31 274 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 TRIM16LQ309B1 348 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 HSD17B13Q7Z5P4 300 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 OR5B3Q8NH48 314 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 OR4C12Q96R67 309 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 TMEM14BQ9NUH8 114 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 GPR132Q9UNW8 380 aa13.76□□□□□ -0.21
PDLIM2-206ENST00000409141 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 DBX1A6NMT0 343 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 C15orf61A6NNL5 157 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 B3GALNT1O75752 331 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 SYNJ2BPP57105 145 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 ZNF79Q15937 498 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 KLK9Q2XQG4 91 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 FAM209BQ5JX69 171 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 SPANXN2Q5MJ10 180 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 TOMM5Q8N4H5 51 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 TMEM56Q96MV1 263 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 C5orf66Q9H5L9 145 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 SLC2A8Q9NY64 477 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 KLK9Q9UKQ9 250 aa13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 PRKDCP78527 4128 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-206ENST00000409141 CYB5BO43169 146 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 MECP2P51608 486 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 AKR1C2P52895 323 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 AP3S2P59780 193 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 GDPD1Q8N9F7 314 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 SCGB3A2Q96PL1 93 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 THYN1Q9P016 225 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 S4R3C0 116 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 BMPR1BO00238 502 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 IGKV1-5P01602 117 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 UCP1P25874 307 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 ETV6P41212 452 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 KLF9Q13886 244 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 IZUMO4Q1ZYL8 232 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 SLC25A24Q6NUK1 477 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 OR6Q1Q8NGQ2 317 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 NAA60Q9H7X0 242 aa13.74□□□□□ -0.21
PDLIM2-206ENST00000409141 PPP5D1E7EU14 171 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 OR9G4Q8NGQ1 327 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 RRNAD1Q96FB5 475 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 PRR25Q96S07 402 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 TMEM222Q9H0R3 208 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 DMRT1Q9Y5R6 373 aa13.73□□□□□ -0.21
PDLIM2-206ENST00000409141 LY86O95711 162 aa13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 OR5AC1P0C628 307 aa13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 HSPE1P61604 102 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 DHODHQ02127 395 aa13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 GLYATL2Q8WU03 294 aa13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 CCDC140Q96MF4 163 aa13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 ZNF256Q9Y2P7 627 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-206ENST00000409141 TRBV7-1A0A0A6YYK4 115 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms