RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 DSCAML1Q8TD84 2053 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 CBY3A6NI87 242 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 DIRC3C9JPN6 131 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 NPSP0C0P6 89 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 UBE2L3P68036 154 aaKnown RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 MRPS11P82912 194 aaKnown RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 JOSD1Q15040 202 aaPredicted RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 LINC01551Q86U37 167 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 C11orf42Q8N5U0 333 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 SLC24A4Q8NFF2 622 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 SORL1Q92673 2214 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 AHRRA9YTQ3 701 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 B4DEV8 164 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 IGLV2-14P01704 120 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 CCL3L1P16619 93 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 RAB4AP20338 218 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 MFAP2P55001 183 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 RELBQ01201 579 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 C9orf106Q8NAJ2 232 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 TAAR6Q96RI8 345 aa6.92□□□□□ -1.3
SNX13-201ENST00000409076 POLR3KQ9Y2Y1 108 aaPredicted RBP6.92□□□□□ -1.3
SNX13-201ENST00000409076 HELTA6NFD8 242 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 IL6RP08887 468 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 TPPP2P59282 170 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 BORCS7Q96B45 105 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 STARD4Q96DR4 205 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 RBM14Q96PK6 669 aaKnown RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 TECTBQ96PL2 329 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 SLC35D1Q9NTN3 355 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 DECR2Q9NUI1 292 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 IL36GQ9NZH8 169 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 WIPI2Q9Y4P8 454 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 LSM4Q9Y4Z0 139 aaKnown RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 A0A087WWC5 75 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 ETV2O00321 342 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 HSBP1O75506 76 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 COX7A1P24310 79 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 ZNF138P52744 262 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 MMD2Q8IY49 270 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 OR1B1Q8NGR6 318 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 OR5B3Q8NH48 314 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 BCL2L2Q92843 193 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 NAA38Q9BRA0 125 aaKnown RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 ZNF331Q9NQX6 463 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 EXPH5Q8NEV8 1989 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 TRBV20OR9-2A0A075B6H5 130 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 C15orf62A8K5M9 175 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 J3QR06 171 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 USF1P22415 310 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 TREML4Q6UXN2 200 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 WDR82Q6UXN9 313 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
SNX13-201ENST00000409076 CLEC5AQ9NY25 188 aa6.91□□□□□ -1.3
SNX13-201ENST00000409076 A0A1W2PNU3 283 aaPredicted RBP6.9□□□□□ -1.3
SNX13-201ENST00000409076 MMP23AO75900 390 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
SNX13-201ENST00000409076 ZNF134P52741 427 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 RPEL1Q2QD12 228 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 ACP7Q6ZNF0 438 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 MGST2Q99735 147 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 COMMD5Q9GZQ3 224 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
SNX13-201ENST00000409076 B4E171 279 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 LYNX1G3V0Z9 82 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 LYNX1P0DP58 116 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 COX5BP10606 129 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 GCHFRP30047 84 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 TSPAN7P41732 249 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 FAM27E3Q08E93 113 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 SPATA45Q537H7 98 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 ASCL4Q6XD76 172 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 FOXL2NBQ6ZUU3 175 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 FER1L6-AS2Q96M78 137 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 CIB3Q96Q77 187 aaPredicted RBP6.9□□□□□ -1.3
SNX13-201ENST00000409076 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
SNX13-201ENST00000409076 A8MWP6 167 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 IGKV1-16P04430 117 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 TMEM178AQ8NBL3 297 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 OR10X1Q8NGY0 326 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 DIRC2Q96SL1 478 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 PROCRQ9UNN8 238 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 C2CD3Q4AC94 2353 aa6.9□□□□□ -1.31
SNX13-201ENST00000409076 CUBNO60494 3623 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 COX7A2P2O60397 106 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 PCP4P48539 62 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 TMEM170AQ8WVE7 144 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 LSM10Q969L4 123 aaKnown RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 RCHY1Q96PM5 261 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 NEU1Q99519 415 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms