RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CHCHD1Q96BP2 118 aaKnown RBP14.92□□□□□ -0.02
SMPD4-202ENST00000409031 LOXL4Q96JB6 756 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 NCOR1P1Q9H4R4 102 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 MAJINQ3KP22 176 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 MIR17HGQ75NE6 70 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 NPIPB3Q92617 1050 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 IGHV3OR15-7A0A075B7D8 119 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 A0A1W2PRE2 83 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 J3QW42 95 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 CD33P20138 364 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 TFF2Q03403 129 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 C3AR1Q16581 482 aa14.92□□□□□ -0.02
SMPD4-202ENST00000409031 SRSF7Q16629 238 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMPD4-202ENST00000409031 RBFOX2O43251 390 aaKnown RBP eCLIP14.91□□□□□ -0.021e-7■■■■■ 154.7
SMPD4-202ENST00000409031 NBEAP1P0C6P0 100 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 PRELID3AQ96N28 172 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 GPR82Q96P67 336 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 COX7A1P24310 79 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 TPTE2P1Q5T6R2 138 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 TMEM108Q6UXF1 575 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 IGHV3-21A0A0B4J1V1 117 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 TRAV8-6A0A0B4J262 113 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 IGHV5-10-1A0A0J9YXX1 117 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 SMAGPQ0VAQ4 97 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 REPIN1Q9BWE0 567 aaKnown RBP14.91□□□□□ -0.02
SMPD4-202ENST00000409031 ZNF703Q9H7S9 590 aaPredicted RBP14.91□□□□□ -0.02
SMPD4-202ENST00000409031 LINC00271P0C7V0 271 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 Q6AWC8 147 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 GOLT1AQ6ZVE7 132 aa14.91□□□□□ -0.02
SMPD4-202ENST00000409031 PSME4Q14997 1843 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 C9JCJ5 164 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 C1QTNF5Q9BXJ0 243 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 HEATR5BQ9P2D3 2071 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 SRXN1Q9BYN0 137 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 IFI27L2Q9H2X8 130 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 COL11A2P13942 1736 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-202ENST00000409031 C5orf67F2Z3F1 127 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 HSD52Q0P140 79 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 SLC25A53Q5H9E4 307 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 TMEM144Q7Z5S9 345 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 CLEC5AQ9NY25 188 aa14.9□□□□□ -0.02
SMPD4-202ENST00000409031 STAG3L3P0CL85 134 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 REG1BP48304 166 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 TM4SF20Q53R12 229 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 MRPL16Q9NX20 251 aaKnown RBP14.89□□□□□ -0.03
SMPD4-202ENST00000409031 MPV17L2Q567V2 206 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
SMPD4-202ENST00000409031 DOCK6Q96HP0 2047 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 TMEM30BQ3MIR4 351 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 LY96Q9Y6Y9 160 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 ANK1P16157 1881 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 GAGE12BA1L429 117 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 ZNHIT1O43257 154 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 AGFG2O95081 481 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 HCP5Q6MZN7 132 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 LINC00305Q7Z4B0 112 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 MPDZO75970 2070 aa14.89□□□□□ -0.03
SMPD4-202ENST00000409031 MGPP08493 103 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 RASL11AQ6T310 242 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 CACNG8Q8WXS5 425 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 FAM181BA6NEQ2 426 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 ATP5LO75964 103 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 GOSR1O95249 250 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 BHLHA15Q7RTS1 189 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-202ENST00000409031 ATP5L2Q7Z4Y8 100 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 FAM169BQ8N8A8 192 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 SSBP4Q9BWG4 385 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-202ENST00000409031 MRPL27Q9P0M9 148 aaKnown RBP14.88□□□□□ -0.03
SMPD4-202ENST00000409031 ONECUT1Q9UBC0 465 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 APELAP0DMC3 54 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 CCL4P13236 92 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 NRN1LQ496H8 165 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 IFNL4K9M1U5 179 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 TMEM160Q9NX00 188 aa14.88□□□□□ -0.03
SMPD4-202ENST00000409031 TDRD6O60522 2096 aaKnown RBP14.87□□□□□ -0.03
SMPD4-202ENST00000409031 MBNL2Q5VZF2 373 aaKnown RBP14.87□□□□□ -0.03
SMPD4-202ENST00000409031 OR9G4Q8NGQ1 327 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 LINC00470Q9BZP3 86 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
SMPD4-202ENST00000409031 HGFACQ04756 655 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 Q0VG73 95 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 OCIAD2Q56VL3 154 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 TMEM14EPQ6UXP3 125 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 FMC1Q96HJ9 113 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 SCN10AQ9Y5Y9 1956 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 TYMSP04818 313 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 CELA2AP08217 269 aa14.87□□□□□ -0.03
SMPD4-202ENST00000409031 CD5LO43866 347 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 EFNB3Q15768 340 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 CSRP2Q16527 193 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 IDI2-AS1Q9NZ38 188 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 IGHV1-45A0A0A0MS14 117 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 H7C2G1 150 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 PSG1P11464 419 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 DGAT2L7PQ6IED9 249 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 ORMDL3Q8N138 153 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 C18orf15Q96N68 181 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 LOC285556D6RIA3 1793 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms