RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 SLC25A40Q8TBP6 338 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 C11orf52Q96A22 123 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-205ENST00000404914 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 TRGV10A0A0A0MS01 117 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
ATG4B-205ENST00000404914 C1orf229Q6ZS94 237 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-205ENST00000404914 UQCR10Q9UDW1 63 aa12.81□□□□□ -0.36
ATG4B-205ENST00000404914 CNOT1A5YKK6 2376 aaKnown RBP12.81□□□□□ -0.36
ATG4B-205ENST00000404914 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 TRAV9-1A0A075B6T8 112 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 NTF3P20783 257 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 DUTP33316 252 aaKnown RBP12.8□□□□□ -0.36
ATG4B-205ENST00000404914 CX3CL1P78423 397 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 TIPARPQ7Z3E1 657 aaKnown RBP12.8□□□□□ -0.36
ATG4B-205ENST00000404914 BCL2L2Q92843 193 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-205ENST00000404914 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 C9JCJ5 164 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 IGFBP2P18065 325 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 SLC35E4Q6ICL7 350 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 MOB3BQ86TA1 216 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 TXNDC17Q9BRA2 123 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
ATG4B-205ENST00000404914 ZNF324O75467 553 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-205ENST00000404914 SP1P08047 785 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 ERASQ7Z444 233 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 TSKUQ8WUA8 353 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 FAM168AQ92567 244 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 CHODLQ9H9P2 273 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 BOKQ9UMX3 212 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-205ENST00000404914 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 A8MXE2 369 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 MPDU1O75352 247 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 CA2P00918 260 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 GATA2P23769 480 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-205ENST00000404914 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 RELBQ01201 579 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 ANKRD39Q53RE8 183 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 C20orf202A1L168 122 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 NBL1P41271 181 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 GNG4P50150 75 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 PRRX1P54821 245 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 ZNF503Q96F45 646 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 HSD17B10Q99714 261 aaKnown RBP12.79□□□□□ -0.36
ATG4B-205ENST00000404914 CDC42EP3Q9UKI2 254 aa12.79□□□□□ -0.36
ATG4B-205ENST00000404914 SLAQ13239 276 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 TMEM251Q8N6I4 163 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 CLEC7AQ9BXN2 247 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 FZR1Q9UM11 496 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 LOC400499M0QZD8 3231 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 SAA2-SAA4A0A096LPE2 208 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 M0R1X1 148 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 IGLV2-8P01709 118 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 CD59P13987 128 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 CEACAM8P31997 349 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-205ENST00000404914 PSG5Q15238 335 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 AARDQ4LEZ3 155 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 LYG1Q8N1E2 194 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-205ENST00000404914 OBP2BQ9NPH6 170 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
ATG4B-205ENST00000404914 SPENQ96T58 3664 aaKnown RBP12.77□□□□□ -0.36
ATG4B-205ENST00000404914 ARFGEF3Q5TH69 2177 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 HELTA6NFD8 242 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 NTN3O00634 580 aaPredicted RBP12.77□□□□□ -0.36
ATG4B-205ENST00000404914 TSPOP30536 169 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 ZNF134P52741 427 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 TMPRSS3P57727 454 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 CT55Q8WUE5 264 aa12.77□□□□□ -0.36
ATG4B-205ENST00000404914 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 OR10J4P0C629 311 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 GPR12P47775 334 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 RHOBP62745 196 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 NPVFQ9HCQ7 196 aa12.77□□□□□ -0.37
ATG4B-205ENST00000404914 LINC00869P0C866 280 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 LEAP2Q969E1 77 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 TECRQ9NZ01 308 aaKnown RBP12.76□□□□□ -0.37
ATG4B-205ENST00000404914 KNTC1P50748 2209 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 LINC00696Q6ZRV3 163 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 ASCL5Q7RTU5 278 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
ATG4B-205ENST00000404914 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
ATG4B-205ENST00000404914 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms