RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 IMMP2LQ96T52 175 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
TSC2-204ENST00000401874 CGB1A6NKQ9 187 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 ZNF324O75467 553 aaPredicted RBP14.06□□□□□ -0.16
TSC2-204ENST00000401874 CD5P06127 495 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 ARF6P62330 175 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 ATP5G2Q06055 141 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 MEF2CQ06413 473 aaPredicted RBP14.06□□□□□ -0.16
TSC2-204ENST00000401874 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 TMEM136Q6ZRR5 245 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 LHFPL1Q86WI0 220 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 COLQQ9Y215 455 aaPredicted RBP14.06□□□□□ -0.16
TSC2-204ENST00000401874 LDLRAD4O15165 306 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 CLEC2AQ6UVW9 174 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 IZUMO1RA6ND01 250 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 IGHV3-48P01763 117 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 MST1P26927 711 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 WFDC1Q9HC57 220 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 GREB1Q4ZG55 1949 aa14.06□□□□□ -0.16
TSC2-204ENST00000401874 IGHV1-2P23083 117 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 HERPUD1Q15011 391 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 FDCSPQ8NFU4 85 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 EEF1AKMT3Q96AZ1 226 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 TMEM106BQ9NUM4 274 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 LOC107984156A0A0G2JMH3 177 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 A0A1B0GW15 77 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 LHX2P50458 406 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 MIR17HGQ75NE6 70 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 ARL17AQ8IVW1 177 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 RPP21Q9H633 154 aaKnown RBP14.05□□□□□ -0.16
TSC2-204ENST00000401874 SPTBP11277 2137 aa14.05□□□□□ -0.16
TSC2-204ENST00000401874 RBFOX2O43251 390 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■□ 26.2
TSC2-204ENST00000401874 MBNL2Q5VZF2 373 aaKnown RBP14.05□□□□□ -0.16
TSC2-204ENST00000401874 KNTC1P50748 2209 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 YPEL1O60688 119 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 YPEL2Q96QA6 119 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 CRYGSP22914 178 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 NPPCP23582 126 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 ZNF324BQ6AW86 544 aaPredicted RBP14.04□□□□□ -0.16
TSC2-204ENST00000401874 TMEM144Q7Z5S9 345 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 PEF1Q9UBV8 284 aaKnown RBP14.04□□□□□ -0.16
TSC2-204ENST00000401874 IGKV1D-8A0A087WSZ0 117 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 A1L4Q6 167 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 C7orf71A4D174 169 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 LINC00587B1AMM8 73 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 FOXA3P55318 350 aaPredicted RBP14.04□□□□□ -0.16
TSC2-204ENST00000401874 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 MBD3L1Q8WWY6 194 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 CYTL1Q9NRR1 136 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
TSC2-204ENST00000401874 TEX45Q8NA69 505 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 ZNF414Q96IQ9 312 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 GPR82Q96P67 336 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 LINC00312Q9Y6C7 94 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 TRAV24A0A0B4J272 114 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 CRXO43186 299 aaPredicted RBP14.03□□□□□ -0.16
TSC2-204ENST00000401874 TMPRSS3P57727 454 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 JOSD1Q15040 202 aaPredicted RBP14.03□□□□□ -0.16
TSC2-204ENST00000401874 FAM106AQ4KMX7 169 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 Q6AWC8 147 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 APOBEC3AP31941 199 aaPredicted RBP14.03□□□□□ -0.16
TSC2-204ENST00000401874 TNFSF10P50591 281 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 CCL20P78556 96 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 ZNF256Q9Y2P7 627 aaPredicted RBP14.03□□□□□ -0.16
TSC2-204ENST00000401874 A0A1B0GW64 132 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 FAM90A9PA6NNJ1 464 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 LGALS3P17931 250 aaKnown RBP14.03□□□□□ -0.16
TSC2-204ENST00000401874 DLX6P56179 175 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 HEPN1Q6WQI6 88 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 FAM216BQ8N7L0 139 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 DCTN5Q9BTE1 182 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 WNT10AQ9GZT5 417 aa14.03□□□□□ -0.16
TSC2-204ENST00000401874 A0A1B0GUT8 65 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 LTBRP36941 435 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 TFPI2P48307 235 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 RTN4RL2Q86UN3 420 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 F11RQ9Y624 299 aaKnown RBP14.02□□□□□ -0.16
TSC2-204ENST00000401874 PRELID3AQ96N28 172 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 REG4Q9BYZ8 158 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 CHODLQ9H9P2 273 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 TMEM242Q9NWH2 141 aa14.02□□□□□ -0.16
TSC2-204ENST00000401874 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 GPX1P07203 203 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 TRBV20OR9-2A0A075B6H5 130 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BKO60814 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BJP06899 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BOP23527 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BBP33778 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BDP58876 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BCP62807 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST2H2BEQ16778 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.02□□□□□ -0.17
TSC2-204ENST00000401874 FAM166AQ6J272 317 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BHQ93079 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BNQ99877 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 HIST1H2BMQ99879 126 aa14.02□□□□□ -0.17
TSC2-204ENST00000401874 MRPL20Q9BYC9 149 aaKnown RBP14.02□□□□□ -0.17
TSC2-204ENST00000401874 UPK2O00526 184 aa14.01□□□□□ -0.17
TSC2-204ENST00000401874 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
TSC2-204ENST00000401874 FOXD3Q9UJU5 478 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms