RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 A0A1W2PPB8 328 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 KIR3DP1A8MWS1 328 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 NPPCP23582 126 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 GLRXP35754 106 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 GFI1BQ5VTD9 330 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 GTSCR1Q86UQ5 136 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 ZNF479Q96JC4 524 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 ADARB2-AS1A8MUL3 147 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 MS4A4AQ96JQ5 239 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 OR2H1Q9GZK4 316 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 RPRMQ9NS64 109 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 MRPL27Q9P0M9 148 aaKnown RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 ALS2Q96Q42 1657 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 TRBV6-7A0A0A0MS04 114 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 IGHV3-35A0A0C4DH35 117 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 UPK3AO75631 287 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 OR9G9P0C7N8 305 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 FUT5Q11128 374 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 ZNF385AQ96PM9 386 aaKnown RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 CLEC7AQ9BXN2 247 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 GFRA3O60609 400 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 TMEM74BQ9NUR3 256 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 KMT2EQ8IZD2 1858 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 DOCK8Q8NF50 2099 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 A0A1B0GWJ7 208 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 KLF4O43474 513 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 CEACAM8P31997 349 aaPredicted RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 CCL20P78556 96 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 PIGYQ3MUY2 71 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 NRN1LQ496H8 165 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 C1QL3Q5VWW1 255 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 AGMATQ9BSE5 352 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
CHD8-201ENST00000399982 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 AMBPP02760 352 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 POU2AF1Q16633 256 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 WDR82Q6UXN9 313 aa7.17□□□□□ -1.26
CHD8-201ENST00000399982 PPIAL4EA0A075B759 164 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 PPIAL4DF5H284 164 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 CLPSP04118 112 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 PPIAL4FP0DN26 164 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 PPIAL4AQ9Y536 164 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 DOCK2Q92608 1830 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 ABCA3Q99758 1704 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 LMO7DNF2Z398 122 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 MGST3O14880 152 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 UCP1P25874 307 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 FGFRL1Q8N441 504 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 APOBEC4Q8WW27 367 aaKnown RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 Q96M66 194 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 REPIN1Q9BWE0 567 aaKnown RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 NCR2O95944 276 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 ASIPP42127 132 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 RPL23P62829 140 aaKnown RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 SH3BGRL3Q9H299 93 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 RPP21Q9H633 154 aaKnown RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 HCSTQ9UBK5 93 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 IGHMP01871 453 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 PKD1L3Q7Z443 1732 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 IGHV3OR16-13A0A075B7E8 117 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 IGHV3-74A0A0B4J1X5 117 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 CACNG8Q8WXS5 425 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 PLSCR4Q9NRQ2 329 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 KNL1Q8NG31 2342 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 SVIPQ8NHG7 77 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 KCNK17Q96T54 332 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 TM2D1Q9BX74 207 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 NPCDR1Q9BY65 106 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 LRP5O75197 1615 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 BCORQ6W2J9 1755 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 FER1L5A0AVI2 2057 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 M0R2P5 195 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 CGB3P0DN86 165 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 ICAM4Q14773 271 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 TRIP6Q15654 476 aaKnown RBP7.16□□□□□ -1.26
CHD8-201ENST00000399982 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 COX14Q96I36 57 aa7.16□□□□□ -1.26
CHD8-201ENST00000399982 A8MWP6 167 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 DPM2O94777 84 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 COX5BP10606 129 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 RPL8P62917 257 aaKnown RBP7.15□□□□□ -1.26
CHD8-201ENST00000399982 C1orf185Q5T7R7 199 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 LAIR2Q6ISS4 152 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 INO80CQ6PI98 192 aaPredicted RBP7.15□□□□□ -1.26
CHD8-201ENST00000399982 ARPC1AQ92747 370 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 SIGLEC1Q9BZZ2 1709 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 CRYBB3P26998 211 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 ATP5J2P56134 94 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 PCSK4Q6UW60 755 aa7.15□□□□□ -1.26
CHD8-201ENST00000399982 GLMPQ8WWB7 406 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms