RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 TMEM171Q8WVE6 324 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
ITSN1-209ENST00000399352 SCN7AQ01118 1682 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 NUDT10Q8NFP7 164 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
ITSN1-209ENST00000399352 RNASEH2CQ8TDP1 164 aaKnown RBP13.64□□□□□ -0.23
ITSN1-209ENST00000399352 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 SPAARA0A1B0GVQ0 90 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 SYNGR3O43761 229 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 IGHV4-39P01824 125 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 IGHMP01871 453 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 GLRX5Q86SX6 157 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 AKAP6Q13023 2319 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 IGHV3OR16-8A0A075B7F1 116 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 IGKV1D-43A0A0B4J1Z2 117 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 CEACAM1P13688 526 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 LEPP41159 167 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 CCL20P78556 96 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 LY6EQ16553 131 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
ITSN1-209ENST00000399352 ITGB4P16144 1822 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 A0A1B0GTI1 187 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 PLAURQ03405 335 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 TM2D1Q9BX74 207 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 LOC390937A0A1W2PQ73 354 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 H0YIZ8 118 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-209ENST00000399352 CSRP3P50461 194 aa13.63□□□□□ -0.23
ITSN1-209ENST00000399352 HEPN1Q6WQI6 88 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 SHISA5Q8N114 240 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 PNKDQ8N490 385 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 PRR33A8MZF0 331 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 TIMP4Q99727 224 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 TSPOP30536 169 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 GNG5P63218 68 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 HIST3H2BBQ8N257 126 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 NAA38Q9BRA0 125 aaKnown RBP13.62□□□□□ -0.23
ITSN1-209ENST00000399352 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
ITSN1-209ENST00000399352 TMEM262E9PQX1 116 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 RAB9AP51151 201 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 OR2K2Q8NGT1 345 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 VKORC1Q9BQB6 163 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 FOXA2Q9Y261 457 aaPredicted RBP13.61□□□□□ -0.23
ITSN1-209ENST00000399352 NDUFS6O75380 124 aaKnown RBP13.61□□□□□ -0.23
ITSN1-209ENST00000399352 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 ASIPP42127 132 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 FER1L6-AS1Q8NA97 138 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 SMIM10Q96HG1 83 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 FMC1Q96HJ9 113 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 VCX2Q9H322 139 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 ESPL1Q14674 2120 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 COX5BP10606 129 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 DUX5Q96PT3 197 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 CLEC7AQ9BXN2 247 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 AHCTF1Q8WYP5 2266 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 TRBV7-9A0A0J9YWB2 115 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 NAPSAO96009 420 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 CXCL1P09341 107 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
ITSN1-209ENST00000399352 ZNF585BQ52M93 769 aa13.61□□□□□ -0.23
ITSN1-209ENST00000399352 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 TMEM54Q969K7 222 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 DUSP15Q9H1R2 295 aaPredicted RBP13.6□□□□□ -0.23
ITSN1-209ENST00000399352 HS3ST3B1Q9Y662 390 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 SCN2AQ99250 2005 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 OTOFQ9HC10 1997 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 COLCA2A8K830 154 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 FGF16O43320 207 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 AMBPP02760 352 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 JMJD8Q96S16 334 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 Q9H3A6 140 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 CDCP2Q5VXM1 449 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 NPFFR1Q9GZQ6 430 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
ITSN1-209ENST00000399352 NDUFA2O43678 99 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 CTSSP25774 331 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 OR4X2Q8NGF9 303 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 DCTN5Q9BTE1 182 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 A0A087WV48 116 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 F8VVB4 439 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 F8VWA3 439 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 CD55P08174 381 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
ITSN1-209ENST00000399352 TIMM23BQ5SRD1 257 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-209ENST00000399352 OR13A1Q8NGR1 328 aa13.59□□□□□ -0.23
ITSN1-209ENST00000399352 HEATR5BQ9P2D3 2071 aa13.58□□□□□ -0.23
ITSN1-209ENST00000399352 SCARF2Q96GP6 870 aaPredicted RBP13.58□□□□□ -0.23
ITSN1-209ENST00000399352 IGKV3D-20A0A0C4DH25 116 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms