RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 CFHR2P36980 270 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 RPL31P62899 125 aaKnown RBP11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 JOSD1Q15040 202 aaPredicted RBP11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 PPP1R35Q8TAP8 253 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 RAB1CQ92928 201 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 SFRP2Q96HF1 295 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 NPVFQ9HCQ7 196 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 ABCA4P78363 2273 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 GRIFINA4D1Z8 144 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 DDTP30046 118 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 GCHFRP30047 84 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TIMP3P35625 211 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 OR5I1Q13606 314 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 LRFN3Q9BTN0 628 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 MUC6Q6W4X9 2439 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 HSPE1P61604 102 aaKnown RBP11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TIMM23BQ5SRD1 257 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
CCDC144A-205ENST00000399264 A0A087X0M5 115 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 A0A1B0GX30 115 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 TMPRSS2O15393 492 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 SRP14P37108 136 aaKnown RBP11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 REG1BP48304 166 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 TNFAIP6P98066 277 aaPredicted RBP11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 TEPPQ6URK8 271 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 F6UZH7 168 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 TM4SF5O14894 197 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 CXorf1O96002 111 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 CT45A6P0DMU7 189 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 CT45A5P0DMU8 189 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 CT45A7P0DMV0 189 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 COA6Q5JTJ3 125 aaKnown RBP11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 ZADH2Q8N4Q0 377 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 RNF7Q9UBF6 113 aa11.88□□□□□ -0.51
CCDC144A-205ENST00000399264 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 E7EUB6 86 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 MPDU1O75352 247 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 FCN3O75636 299 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 OR4A8P0C604 315 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 LINC00869P0C866 280 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 IGLV3-9A0A075B6K5 115 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 TRGV10A0A0A0MS01 117 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 A0A1B0GV90 55 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 TYMSP04818 313 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 CBLN1P23435 193 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 MZT1Q08AG7 82 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 STUMQ69YW2 141 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 TEX38Q6PEX7 206 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 J3QR06 171 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 SPINK4O60575 86 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 CCL3L1P16619 93 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 NDUFB7P17568 137 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 CNN1P51911 297 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 PKIAP61925 76 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 DIAPH2-AS1Q14236 149 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
CCDC144A-205ENST00000399264 DVL1O14640 695 aa11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 OR10J4P0C629 311 aa11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 ADMP35318 185 aa11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 PDLIM4P50479 330 aa11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 SH3BGRL2Q9UJC5 107 aa11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 FOXA2Q9Y261 457 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 GATCO43716 136 aaKnown RBP11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 MRPL41Q8IXM3 137 aaKnown RBP11.86□□□□□ -0.51
CCDC144A-205ENST00000399264 TRGV8A0A0C4DH27 118 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 RNF224P0DH78 156 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 CCKARP32238 428 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 RAB7AP51149 207 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRR20EP86478 221 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRR20CP86479 221 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRR20DP86480 221 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRR20BP86481 221 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PRR20AP86496 221 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 PSG5Q15238 335 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 TMEM249Q2WGJ8 235 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 MORN5Q5VZ52 161 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 FAM169BQ8N8A8 192 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
CCDC144A-205ENST00000399264 ENY2Q9NPA8 101 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms