RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 NHP2Q9NX24 153 aaKnown RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 SCAND1P57086 179 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 MMD2Q8IY49 270 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 SHISA5Q8N114 240 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 A0A1W2PQD3 144 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 PQLC2LA1A4F0 135 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 MPDU1O75352 247 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 ZNF415Q09FC8 603 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 CD300LDQ6UXZ3 194 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 COLCA1Q6ZS62 124 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 GTSF1LQ9H1H1 148 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 IDI2-AS1Q9NZ38 188 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 HBBP68871 147 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 LAMTOR1Q6IAA8 161 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 GOLT1AQ6ZVE7 132 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 TMEM70Q9BUB7 260 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 FOXA2Q9Y261 457 aaPredicted RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 IGHV3-64A0A075B6Q5 118 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 FGF5P12034 268 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 CD69Q07108 199 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 FAM106AQ4KMX7 169 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 HOGA1Q86XE5 327 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 DUX3Q96PT4 197 aa7.94□□□□□ -1.14
ATL3-201ENST00000398868 EP300Q09472 2414 aaPredicted RBP7.94□□□□□ -1.14
ATL3-201ENST00000398868 C7orf66A4D0T2 115 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 MPTX1A8MV57 137 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 S1PR2O95136 353 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 DNASE2BQ8WZ79 361 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 GPR146Q96CH1 333 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 PHF3Q92576 2039 aaKnown RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 SCO2A0A1W2PP80 73 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 M0R381 172 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 TNFRSF14Q92956 283 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 TMEM45BQ96B21 275 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 C19orf67A6NJJ6 358 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 MEF2CQ06413 473 aaPredicted RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 SELENOHQ8IZQ5 122 aaKnown RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 LINC01587Q99440 93 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 GCM2O75603 506 aaPredicted RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 ADMP35318 185 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 CEACAM1P13688 526 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 RPL8P62917 257 aaKnown RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 C2orf68Q2NKX9 166 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 SSBP4Q9BWG4 385 aaPredicted RBP7.93□□□□□ -1.14
ATL3-201ENST00000398868 CHST5Q9GZS9 411 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 COX11Q9Y6N1 276 aa7.93□□□□□ -1.14
ATL3-201ENST00000398868 IGHV3-73A0A0B4J1V6 119 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 TRAV40A0A0B4J280 105 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 PRTN3P24158 256 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 APOBEC3AP31941 199 aaPredicted RBP7.92□□□□□ -1.14
ATL3-201ENST00000398868 C9orf106Q8NAJ2 232 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 SYNGR3O43761 229 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 MT-ND6P03923 174 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 CCL3L1P16619 93 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 SERF2P84101 59 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 NRN1LQ496H8 165 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 BRD3OSQ6XYD6 125 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 IL17RELQ6ZVW7 336 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 EDA2RQ9HAV5 297 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 LAMTOR2Q9Y2Q5 125 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 TUBGCP6Q96RT7 1819 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 PCSK4Q6UW60 755 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 NABP2Q9BQ15 211 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 SCN4AP35499 1836 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 LIPFP07098 398 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 ZNF645Q8N7E2 425 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 KLRD1Q13241 179 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 DEGS2Q6QHC5 323 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 WDR34Q96EX3 536 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 C5orf66Q9H5L9 145 aa7.92□□□□□ -1.14
ATL3-201ENST00000398868 ODAMA1E959 279 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 LOXL4Q96JB6 756 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 AQP10Q96PS8 301 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 TRGV2A0A075B6R0 118 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 TRAV8-4A0A0B4J246 113 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 PRR32B1ATL7 298 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 TMEM50AO95807 157 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 DLL3Q9NYJ7 618 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 PGLYRP1O75594 196 aaPredicted RBP7.91□□□□□ -1.14
ATL3-201ENST00000398868 CECR9P0C854 216 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 GATA2P23769 480 aaPredicted RBP7.91□□□□□ -1.14
ATL3-201ENST00000398868 FGFRL1Q8N441 504 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 ZNF107Q9UII5 783 aaPredicted RBP7.91□□□□□ -1.14
ATL3-201ENST00000398868 XIRP1Q702N8 1843 aaKnown RBP7.91□□□□□ -1.14
ATL3-201ENST00000398868 DANCRP0C864 163 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 VDAC2P45880 294 aaPredicted RBP7.91□□□□□ -1.14
ATL3-201ENST00000398868 EFNB1P98172 346 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 CLEC7AQ9BXN2 247 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 NPFFO15130 113 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 SYT8Q8NBV8 401 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 MRAPQ8TCY5 172 aa7.91□□□□□ -1.14
ATL3-201ENST00000398868 LHFPL6Q9Y693 200 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms