RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 GBGT1Q8N5D6 347 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 FBLN5Q9UBX5 448 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-204ENST00000397545 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 CA2P00918 260 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 PTGDSP41222 190 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 PSG7Q13046 419 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 P2RY6Q15077 328 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 TCF23Q7RTU1 214 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 PLPPR1Q8TBJ4 325 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 SNRNP40Q96DI7 357 aaKnown RBP9.08□□□□□ -0.96
CCDC40-204ENST00000397545 C14orf144Q96I85 54 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 FOXJ2Q9P0K8 574 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 TECTAO75443 2155 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
CCDC40-204ENST00000397545 NAPSAO96009 420 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 COX5BP10606 129 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 SCGB1D4Q6XE38 83 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF738Q8NE65 137 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 RBM14Q96PK6 669 aaKnown RBP9.08□□□□□ -0.96
CCDC40-204ENST00000397545 VSIRQ9H7M9 311 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 HIGD1AQ9Y241 93 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 PRR33A8MZF0 331 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 MOSP00540 346 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 UMODP07911 640 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 FAM166AQ6J272 317 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 FAM19A2Q8N3H0 131 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 GATAD1Q8WUU5 269 aa9.08□□□□□ -0.96
CCDC40-204ENST00000397545 LDLRAD4O15165 306 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 C1QTNF9P0C862 333 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
CCDC40-204ENST00000397545 OR4B1Q8NGF8 309 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 C10orf142B7Z368 130 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 IGFBP2P18065 325 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 CD82P27701 267 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 MAS1LP35410 378 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 HERPUD1Q15011 391 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 OR8B3Q8NGG8 313 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 RAB37Q96AX2 223 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 ARFGEF3Q5TH69 2177 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 IL6RP08887 468 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-204ENST00000397545 LGALS7P47929 136 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 TMEM97Q5BJF2 176 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 LHFPL1Q86WI0 220 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 SRSF12Q8WXF0 261 aaKnown RBP9.07□□□□□ -0.96
CCDC40-204ENST00000397545 TMEM45BQ96B21 275 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 C1QTNF5Q9BXJ0 243 aa9.07□□□□□ -0.96
CCDC40-204ENST00000397545 FOXD3Q9UJU5 478 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-204ENST00000397545 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 RAMP3O60896 148 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 CD5P06127 495 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 CXCL1P09341 107 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 RPL30P62888 115 aaKnown RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 HOXA4Q00056 320 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ID3Q02535 119 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 LBHQ53QV2 105 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ST6GALNAC6Q969X2 333 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 OR8B2Q96RD0 313 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 RAB1BQ9H0U4 201 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF703Q9H7S9 590 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF430Q9H8G1 570 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 TMEM56-RWDD3S4R434 201 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 SELENOTP62341 195 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF788Q6ZQV5 615 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 BMPERQ8N8U9 685 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 TUBA4BQ9H853 241 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 HSPB7Q9UBY9 170 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 FCGR2BP31994 310 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF841Q6ZN19 808 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 MRPL37Q9BZE1 423 aaKnown RBP9.06□□□□□ -0.96
CCDC40-204ENST00000397545 S4R3C0 116 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 TMEM131Q92545 1883 aa9.06□□□□□ -0.96
CCDC40-204ENST00000397545 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 MUC21A0A0G2JKD1 596 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 MUC21A0A140T8X8 626 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 OR2T8A6NH00 312 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 SNAI2O43623 268 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 CECR9P0C854 216 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 PRB4P10163 310 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-204ENST00000397545 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-204ENST00000397545 MUC21Q5SSG8 566 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 PCSK4Q6UW60 755 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 GCSAMQ8N6F7 178 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 ZNF441Q8N8Z8 693 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 DEPPQ9NTK1 212 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
CCDC40-204ENST00000397545 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms