RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LYL1P12980 280 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 AANATQ16613 207 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 SPANXN5Q5MJ07 72 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 Q6YL49 198 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 OR8H1Q8NGG4 311 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 RAB40CQ96S21 281 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 FAM103A1Q9BTL3 118 aaKnown RBP16.84■□□□□ 0.29
CPNE1-204ENST00000397443 C11orf1Q9H5F2 150 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 MOB4Q9Y3A3 225 aa16.84■□□□□ 0.29
CPNE1-204ENST00000397443 A0A1B0GW64 132 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 BTBD17A6NE02 478 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 CGB1A6NKQ9 187 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 CXCL2P19875 107 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 RPL27AP46776 148 aaKnown RBP16.83■□□□□ 0.28
CPNE1-204ENST00000397443 COMPP49747 757 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-204ENST00000397443 SSBP2P81877 361 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-204ENST00000397443 PRCDQ00LT1 54 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 ABHD5Q8WTS1 349 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 NDUFA4L2Q9NRX3 87 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 PITPNC1Q9UKF7 332 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 HSPB11Q9Y547 144 aa16.83■□□□□ 0.28
CPNE1-204ENST00000397443 RPL23AP62750 156 aaKnown RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 TMEM267Q0VDI3 215 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 FXYD3Q14802 87 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 HMSDA8MTL9 139 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 RPL12P30050 165 aaKnown RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 NUP62P37198 522 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 CX3CL1P78423 397 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 LGALSLQ3ZCW2 172 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 TMEM65Q6PI78 240 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 C9orf62Q8N4C0 152 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 OR2C3Q8N628 320 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 C5orf56Q8N8D9 126 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 SRSF12Q8WXF0 261 aaKnown RBP16.82■□□□□ 0.28
CPNE1-204ENST00000397443 HIPK2Q9H2X6 1198 aa16.82■□□□□ 0.28
CPNE1-204ENST00000397443 RNF222A6NCQ9 220 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 REG1AP05451 166 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 HKR1P10072 659 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 MAS1LP35410 378 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 VDAC2P45880 294 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-204ENST00000397443 P2RY1P47900 373 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 C9orf152Q5JTZ5 239 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 LAMTOR1Q6IAA8 161 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 SSMEM1Q8WWF3 244 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 HSPB9Q9BQS6 159 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 LYRM2Q9NU23 88 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-204ENST00000397443 WSB1Q9Y6I7 421 aa16.81■□□□□ 0.28
CPNE1-204ENST00000397443 IGSF23A1L1A6 192 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 GPR137BO60478 399 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 FOSL1P15407 271 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 NDPQ00604 133 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 PDLIM3Q53GG5 364 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-204ENST00000397443 SMIM8Q96KF7 97 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 CIB3Q96Q77 187 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-204ENST00000397443 CST7O76096 145 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 IFNA10P01566 189 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 METTL15P1P0C7V9 234 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 ACOT7LQ6ZUV0 252 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 OR5R1Q8NH85 324 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 OR4C12Q96R67 309 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 CACFD1Q9UGQ2 172 aa16.8■□□□□ 0.28
CPNE1-204ENST00000397443 CUBNO60494 3623 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 IGHV7-81A0A0B4J1V7 117 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 INAFM1C9JVW0 142 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 AMY1AP04745 511 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 OR13C7P0DN81 318 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 SRD5A1P18405 259 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 NHLH2Q02577 135 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 WT1-ASQ06250 92 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 RBMS3Q6XE24 437 aaKnown RBP16.79■□□□□ 0.28
CPNE1-204ENST00000397443 TMEM217Q8N7C4 229 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 ARPC1AQ92747 370 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 BSCL2Q96G97 398 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-204ENST00000397443 TMEM160Q9NX00 188 aa16.79■□□□□ 0.28
CPNE1-204ENST00000397443 NSD1Q96L73 2696 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-204ENST00000397443 HLA-DRB1P01911 266 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 AREGP15514 252 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 ZNF562Q6V9R5 426 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 C19orf35Q6ZS72 473 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 TMEM252Q8N6L7 170 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 SMIM3Q9BZL3 60 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 ARL6Q9H0F7 186 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 PARP11Q9NR21 331 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 VPREB3Q9UKI3 123 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 FGF16O43320 207 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 OR8G2PQ6IF36 304 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 AQP10Q96PS8 301 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 PRDM13Q9H4Q3 707 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 CDC42EP3Q9UKI2 254 aa16.78■□□□□ 0.28
CPNE1-204ENST00000397443 STRAPQ9Y3F4 350 aaKnown RBP16.78■□□□□ 0.28
CPNE1-204ENST00000397443 A0A1W2PN81 502 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 LINC01548A6NM66 108 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 TEX22C9J3V5 150 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 TSC22D2O75157 780 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 CHRNA7P36544 502 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 TAS2R30P59541 319 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 BLCAPP62952 87 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 EWSR1Q01844 656 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPNE1-204ENST00000397443 FBXO7Q9Y3I1 522 aa16.77■□□□□ 0.28
CPNE1-204ENST00000397443 IGLC7A0M8Q6 106 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms